RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ACTL7AQ9Y615 435 aa24.05■■□□□ 1.44
CDK9-201ENST00000373264 DOCK4Q8N1I0 1966 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 TBX4P57082 545 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 NSUN2Q08J23 767 aaKnown RBP eCLIP24.04■■□□□ 1.44
CDK9-201ENST00000373264 TMCO4Q5TGY1 634 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 RNF148Q8N7C7 305 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 OR13J1Q8NGT2 312 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 DDX50Q9BQ39 737 aaKnown RBP24.04■■□□□ 1.44
CDK9-201ENST00000373264 TRIM62Q9BVG3 475 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 POMKQ9H5K3 350 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 IGSF5Q9NSI5 407 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 AP3B1O00203 1094 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 CPB1P15086 417 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 HADHAP40939 763 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 FSCBQ5H9T9 825 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 NUP93Q8N1F7 819 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 PHC3Q8NDX5 983 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 ANKRD49Q8WVL7 239 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 UROC1Q96N76 676 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 CRISPLD1Q9H336 500 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 TBC1D13Q9NVG8 400 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 DLGAP2Q9P1A6 1054 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 CORO1CQ9ULV4 474 aaPredicted RBP24.04■■□□□ 1.44
CDK9-201ENST00000373264 ARHGAP26Q9UNA1 814 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 LAMA3Q16787 3333 aa24.04■■□□□ 1.44
CDK9-201ENST00000373264 VWA8A3KMH1 1905 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 APOA4P06727 396 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 SKIP12755 728 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 GATMP50440 423 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 ATXN3P54252 364 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 UGP2Q16851 508 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 TIGD7Q6NT04 549 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 GLB1LQ6UWU2 654 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 SNX31Q8N9S9 440 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 RDH11Q8TC12 318 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 MARCH4Q9P2E8 410 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 TLR6Q9Y2C9 796 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 STX16-NPEPL1H3BU86 382 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 UBTFL6P0CB48 400 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 FCGRTP55899 365 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 CDC16Q13042 620 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 MSLNQ13421 630 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 KIAA0930Q6ICG6 404 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 FBXL22Q6P050 247 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 MON1AQ86VX9 555 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 COLGALT2Q8IYK4 626 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 FBXW8Q8N3Y1 598 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 KDM1BQ8NB78 822 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 IMP4Q96G21 291 aaKnown RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 GPAMQ9HCL2 828 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 PRDM5Q9NQX1 630 aaPredicted RBP24.03■■□□□ 1.44
CDK9-201ENST00000373264 SCML2Q9UQR0 700 aa24.03■■□□□ 1.44
CDK9-201ENST00000373264 TMEM88BA6NKF7 163 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 CKBP12277 381 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 PBX3P40426 434 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 DSC1Q08554 894 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 SH2D4BQ5SQS7 431 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 VARS2Q5ST30 1063 aaKnown RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 IL31Q6EBC2 164 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 TRIM67Q6ZTA4 783 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 RCN3Q96D15 328 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 SLC25A51Q9H1U9 297 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 LIN7AO14910 233 aaPredicted RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 H2AFYO75367 372 aaKnown RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 PIRTP0C851 137 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 TSPAN8P19075 237 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 DNAJB2P25686 324 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 ACVRL1P37023 503 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 ASPHQ12797 758 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 PRKAA1Q13131 559 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 PIM3Q86V86 326 aa24.02■■□□□ 1.44
CDK9-201ENST00000373264 USP13Q92995 863 aaPredicted RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 UBE2OQ9C0C9 1292 aaKnown RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 MRPL46Q9H2W6 279 aaKnown RBP24.02■■□□□ 1.44
CDK9-201ENST00000373264 PKNOX1P55347 436 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 RASIP1Q5U651 963 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 TMEM207Q6UWW9 146 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 PHF21BQ96EK2 531 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 ECSITQ9BQ95 431 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 RTKNQ9BST9 563 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 GTSE1Q9NYZ3 720 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 MKI67P46013 3256 aaKnown RBP24.01■■□□□ 1.43
CDK9-201ENST00000373264 OAZ2O95190 189 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 DPP6P42658 865 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 KCNC1P48547 511 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 SERPINH1P50454 418 aaKnown RBP24.01■■□□□ 1.43
CDK9-201ENST00000373264 MARC1Q5VT66 337 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 TRAF7Q6Q0C0 670 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 RSPO2Q6UXX9 243 aaPredicted RBP24.01■■□□□ 1.43
CDK9-201ENST00000373264 UMODL1-AS1Q8N2C9 162 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 OR6P1Q8NGX9 317 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 ZYG11BQ9C0D3 744 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 SP110Q9HB58 689 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 UXTQ9UBK9 157 aaPredicted RBP24.01■■□□□ 1.43
CDK9-201ENST00000373264 MID2Q9UJV3 735 aa24.01■■□□□ 1.43
CDK9-201ENST00000373264 MUSKO15146 869 aa24■■□□□ 1.43
CDK9-201ENST00000373264 CFLARO15519 480 aa24■■□□□ 1.43
CDK9-201ENST00000373264 CCDC166P0CW27 439 aa24■■□□□ 1.43
CDK9-201ENST00000373264 PEX2P28328 305 aa24■■□□□ 1.43
CDK9-201ENST00000373264 SLC12A2P55011 1212 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms