RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 METTL2BQ6P1Q9 378 aaKnown RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 FAM171BQ6P995 826 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 FIP1L1Q6UN15 594 aaKnown RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 SYDE1Q6ZW31 735 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 FIBCD1Q8N539 461 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 SLC4A11Q8NBS3 891 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 VPS33AQ96AX1 596 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 CFAP36Q96G28 342 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 FEM1CQ96JP0 617 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 CNDP2Q96KP4 475 aaKnown RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 SNX18Q96RF0 628 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF717Q9BY31 904 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 MKRN2Q9H000 416 aaKnown RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 LIN7BQ9HAP6 207 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 ZNF302Q9NR11 478 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 DZANK1Q9NVP4 752 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 KLQ9UEF7 1012 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 PTBP2Q9UKA9 531 aaKnown RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 SORCS3Q9UPU3 1222 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 SNCAIPQ9Y6H5 919 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 MAU2Q9Y6X3 613 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 C1orf232A0A0U1RR37 186 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TEX51A0A1B0GUA7 166 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 FAM237BA0A1B0GVD1 139 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TRIM64A6NGJ6 449 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 MEI4A8MW99 385 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PRR5-ARHGAP8B1AHC4 643 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 SLC9A3R1O14745 358 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 EXTL3O43909 919 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CAPN1P07384 714 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CDH1P12830 882 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 NCAM1P13591 858 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 NAMPTP43490 491 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 AP2S1P53680 142 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ARHGAP8P85298 464 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 SLC25A3Q00325 362 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 RELBQ01201 579 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 GCNT1Q02742 428 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 KRT17Q04695 432 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 GRSF1Q12849 480 aaKnown RBP eCLIP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PTK6Q13882 451 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 VGLL4Q14135 290 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CCNG2Q16589 344 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PGS1Q32NB8 556 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 HSF5Q4G112 596 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 IER5Q5VY09 327 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 NEK5Q6P3R8 708 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 C15orf39Q6ZRI6 1047 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 DSG4Q86SJ6 1040 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CCDC33Q8N5R6 958 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 UBL4BQ8N7F7 174 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 BEND7Q8N7W2 519 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 OR10Z1Q8NGY1 313 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 DDX1Q92499 740 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 WWP1Q9H0M0 922 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PORCNQ9H237 461 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 DHX33Q9H6R0 707 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 NANOGQ9H9S0 305 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 WASH6PQ9NQA3 447 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ANLNQ9NQW6 1124 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TXNDC16Q9P2K2 825 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CHORDC1Q9UHD1 332 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 EIF3LQ9Y262 564 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 STYXL1Q9Y6J8 313 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 A0A1W2PPM1 405 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 FAM221AA4D161 298 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 UPK3BL1B0FP48 263 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CLDN25C9JDP6 229 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 UPK3BL2E5RIL1 263 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 MTSS1O43312 755 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ASNA1O43681 348 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ACSL4O60488 711 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PEX10O60683 326 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 BTF3P20290 206 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 COMTP21964 271 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ACAT1P24752 427 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 RRM2P31350 389 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 MAGEA4P43358 317 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 KCNJ1P48048 391 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 GRIA4P48058 902 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 POLD2P49005 469 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 LIG4P49917 911 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 SELPLGQ14242 412 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 FAM47CQ5HY64 1035 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 SEL1L2Q5TEA6 688 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ZCCHC8Q6NZY4 707 aaKnown RBP8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ZFP1Q6P2D0 407 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PLEKHG7Q6ZR37 379 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ENOSF1Q7L5Y1 443 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 CHPFQ8IZ52 775 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 FAM109AQ8N4B1 249 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 TTLQ8NG68 377 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ELMO3Q96BJ8 720 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 ZSWIM1Q9BR11 485 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
ATG4A-203ENST00000372232 NPLQ9BXD5 320 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms