RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 LMAN2Q12907 356 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 CNGA3Q16281 694 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 INO80DQ53TQ3 878 aaPredicted RBP17.7■□□□□ 0.42
SSBP3-203ENST00000371319 CDHR3Q6ZTQ4 885 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 FIBINQ8TAL6 211 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 ISL2Q96A47 359 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 TXNDC16Q9P2K2 825 aa17.7■□□□□ 0.42
SSBP3-203ENST00000371319 MROH6A6NGR9 719 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 TPP1O14773 563 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 VAPBO95292 243 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 PAPSS2O95340 614 aaPredicted RBP17.69■□□□□ 0.42
SSBP3-203ENST00000371319 VIMP08670 466 aaKnown RBP17.69■□□□□ 0.42
SSBP3-203ENST00000371319 MAGEA12P43365 314 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 SCNN1BP51168 640 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 USP4Q13107 963 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 GALNT3Q14435 633 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 ZNF77Q15935 545 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 MICALCLQ6ZW33 695 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 CNPY4Q8N129 248 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 ACMSDQ8TDX5 336 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 ZSWIM3Q96MP5 696 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 SRPK1Q96SB4 655 aaKnown RBP17.69■□□□□ 0.42
SSBP3-203ENST00000371319 TDP1Q9NUW8 608 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 PCMTD2Q9NV79 361 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
SSBP3-203ENST00000371319 ANKRD36A6QL64 1941 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NUP210Q8TEM1 1887 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-203ENST00000371319 PAPLNO95428 1278 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NDST3O95803 873 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 TCF3P15923 654 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 PAMP19021 973 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 CD70P32970 193 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 SPRP35270 261 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-203ENST00000371319 PDK4Q16654 411 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 DUSP6Q16828 381 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 RGS9BPQ6ZS82 235 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 CPLX4Q7Z7G2 160 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 DCLK2Q8N568 766 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 OR13J1Q8NGT2 312 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NKX2-4Q9H2Z4 354 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 NSMCE4AQ9NXX6 385 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 KIAA1522Q9P206 1035 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-203ENST00000371319 GGT7Q9UJ14 662 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 PLLPQ9Y342 182 aa17.68■□□□□ 0.42
SSBP3-203ENST00000371319 LDB2O43679 373 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 PRLP01236 227 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 CYBBP04839 570 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 CRHR1P34998 444 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 ABCG1P45844 678 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 SEPT7Q16181 437 aaKnown RBP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 ING5Q8WYH8 240 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 FAM111AQ96PZ2 611 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 C2orf49Q9BVC5 232 aaPredicted RBP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 INTS6Q9UL03 887 aaKnown RBP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 CHKBQ9Y259 395 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 MTO1Q9Y2Z2 717 aaKnown RBP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 FCF1Q9Y324 198 aaKnown RBP17.67■□□□□ 0.42
SSBP3-203ENST00000371319 KCTD3Q9Y597 815 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 MYO7AQ13402 2215 aa17.67■□□□□ 0.42
SSBP3-203ENST00000371319 ZNF197O14709 1029 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 MT-CO1P00395 513 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PENKP01210 267 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PRKCGP05129 697 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 GABRB3P28472 473 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PLK1P53350 603 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 RHOAP61586 193 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PDE1BQ01064 536 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PDE1CQ14123 709 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 FSTL4Q6MZW2 842 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 NLRP9Q7RTR0 991 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PIGWQ7Z7B1 504 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 TMEM25Q86YD3 366 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 C12orf76Q8N812 135 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ITFG1Q8TB96 612 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 TLE6Q9H808 572 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 FGFR1OP2Q9NVK5 253 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ZMYM5Q9UJ78 669 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ARIH1Q9Y4X5 557 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 K7ERQ8 282 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 TIMM44O43615 452 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 MPP1Q00013 466 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ACVR1Q04771 509 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 TRAF2Q12933 501 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 THOC5Q13769 683 aaKnown RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 PLEKHG6Q3KR16 790 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 RETSATQ6NUM9 610 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ELMSAN1Q6PJG2 1045 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 ZC3HC1Q86WB0 502 aaKnown RBP17.66■□□□□ 0.42
SSBP3-203ENST00000371319 DENND6AQ8IWF6 608 aa17.66■□□□□ 0.42
SSBP3-203ENST00000371319 C2CD4AQ8NCU7 369 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms