RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 DPY19L2P1Q6NXN4 242 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 GJB7Q6PEY0 223 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 DAAM2Q86T65 1068 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 NAXDQ8IW45 347 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 LRRC34Q8IZ02 419 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 ADAMTS14Q8WXS8 1223 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 TBC1D31Q96DN5 1066 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 STAMBPL1Q96FJ0 436 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 CAMK1GQ96NX5 476 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 SIX2Q9NPC8 291 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 ZDHHC18Q9NUE0 388 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 KIAA1522Q9P206 1035 aaPredicted RBP15.2■□□□□ 0.02
LMO4-201ENST00000370542 PCOLCE2Q9UKZ9 415 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 ATP8A1Q9Y2Q0 1164 aa15.2■□□□□ 0.02
LMO4-201ENST00000370542 TYW5A2RUC4 315 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 KLHL33A6NCF5 533 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 THAP12O43422 761 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 PHF2O75151 1096 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 C1QL1O75973 258 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 CER1O95813 267 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 DNTTP04053 509 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PLA2G2AP14555 144 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 UCHL3P15374 230 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 TACR2P21452 398 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 CD27P26842 260 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PON1P27169 355 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 MATKP42679 507 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 GRIA4P48058 902 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 DNA2P51530 1060 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PLK1P53350 603 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 NCALDP61601 193 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PITX1P78337 314 aaPredicted RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 MRPS35P82673 323 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 PTK2Q05397 1052 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 SLC12A1Q13621 1099 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 TAF5Q15542 800 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 ZRSR2Q15696 482 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 HLA-BQ31612 363 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 PITRM1Q5JRX3 1037 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 ZNF571Q7Z3V5 609 aaPredicted RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 CACUL1Q86Y37 369 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 AGGF1Q8N302 714 aaeCLIP15.19■□□□□ 0.02
LMO4-201ENST00000370542 UBL4BQ8N7F7 174 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 FAM131CQ96AQ9 280 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 BIRC7Q96CA5 298 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 KLHL29Q96CT2 875 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 SPDL1Q96EA4 605 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 SERPINB12Q96P63 405 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 CPXM1Q96SM3 734 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 FAM129BQ96TA1 746 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 ELAC2Q9BQ52 826 aaKnown RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 AP1M1Q9BXS5 423 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 MIR1-1HGQ9H1L0 117 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 MTG2Q9H4K7 406 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 GAREM1Q9H706 876 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 IL21RQ9HBE5 538 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 TJP2Q9UDY2 1190 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PCYOX1Q9UHG3 505 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 PACSIN2Q9UNF0 486 aaPredicted RBP15.19■□□□□ 0.02
LMO4-201ENST00000370542 ERVW-1Q9UQF0 538 aa15.19■□□□□ 0.02
LMO4-201ENST00000370542 ANKRD33BA6NCL7 494 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CAPN9O14815 690 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 RASGRF2O14827 1237 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 SIN3BO75182 1162 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 APOEP02649 317 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 PRB1P04280 392 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 IGHV4-34P06331 123 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 FESP07332 822 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 NEFHP12036 1026 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 RNASE9P60153 205 aaKnown RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 CAV1Q03135 178 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CDH18Q13634 790 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 TRADDQ15628 312 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 SPRED3Q2MJR0 410 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 C5orf22Q49AR2 442 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 FAM124AQ86V42 546 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CFAP52Q8N1V2 620 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CARNMT1Q8N4J0 409 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CHCHD4Q8N4Q1 142 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 AGAP11Q8TF27 550 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 DYDC1Q8WWB3 177 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CTNNBL1Q8WYA6 563 aaPredicted RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 TM9SF3Q9HD45 589 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 TM7SF3Q9NS93 570 aa15.18■□□□□ 0.02
LMO4-201ENST00000370542 CPSF2Q9P2I0 782 aaKnown RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
LMO4-201ENST00000370542 A0A1B0GVT2 93 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 TK2O00142 265 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 RARAP10276 462 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 SLC2A3P11169 496 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms