RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KIF5CO60282 957 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3HP0C7X1 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ITPKAP23677 461 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ATP5OP48047 213 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 OTUD4Q01804 1114 aaKnown RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ZBTB17Q13105 803 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 NOMO1Q15155 1222 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 RALGPS1Q5JS13 557 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 LRRC73Q5JTD7 316 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3GQ6DHY5 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3CQ6IPX1 549 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 CDKL3Q8IVW4 592 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 TBC1D3Q8IZP1 549 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ACTL9Q8TC94 416 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 PDCD6IPQ8WUM4 868 aaKnown RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 RAB7BQ96AH8 199 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ZNF641Q96N77 438 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 SEMA3CQ99985 751 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 FERMT1Q9BQL6 677 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 CEP41Q9BYV8 373 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 MIR1-1HGQ9H1L0 117 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 KDM4CQ9H3R0 1056 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 PREBQ9HCU5 417 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 PYCARDQ9ULZ3 195 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.99□□□□□ -0.01
COL9A1-204ENST00000370496 PLXNA2O75051 1894 aa14.99□□□□□ -0.01
COL9A1-204ENST00000370496 METTL12A8MUP2 240 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 HACD1B0YJ81 288 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 MTSS1O43312 755 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SOCS5O75159 536 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 PCDH8O95206 1070 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 JCHAINP01591 159 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 CR2P20023 1033 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ABL2P42684 1182 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 EIF3EP60228 445 aaKnown RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 PPP2CBP62714 309 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 PPP2CAP67775 309 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 DSC2Q02487 901 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SPEM2Q0P670 501 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 CCDC6Q16204 474 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SLC45A4Q5BKX6 768 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 BRAT1Q6PJG6 821 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SYT12Q8IV01 421 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ZCCHC9Q8N567 271 aaKnown RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 BIRC7Q96CA5 298 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 IL12RB2Q99665 862 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 CARD9Q9H257 536 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SUV39H2Q9H5I1 410 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 NOD2Q9HC29 1040 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 DKK3Q9UBP4 350 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 SUSD2Q9UGT4 822 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 TSPAN11A1L157 253 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 USP27XA6NNY8 438 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 UPK3BL1B0FP48 263 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 UPK3BL2E5RIL1 263 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 RNGTTO60942 597 aaKnown RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 CPP00450 1065 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 GNSP15586 552 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 CA4P22748 312 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 HOXD12P35452 270 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 TAS2R38P59533 333 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 XRCC4Q13426 336 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 OTOGLQ3ZCN5 2332 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ZNF569Q5MCW4 686 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ALG1LQ6GMV1 187 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ERAP2Q6P179 960 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 RABEPKQ7Z6M1 372 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 TTC7BQ86TV6 843 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 TTC13Q8NBP0 860 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 VOPP1Q96AW1 172 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 AGAP3Q96P47 875 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 FAM118BQ9BPY3 351 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 VPS45Q9NRW7 570 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 KLHL8Q9P2G9 620 aaPredicted RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 EIF2B4Q9UI10 523 aaKnown RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
COL9A1-204ENST00000370496 ITM2BQ9Y287 266 aa14.98□□□□□ -0.01
COL9A1-204ENST00000370496 GPR179Q6PRD1 2367 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 SDK1Q7Z5N4 2213 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 AP1G1O43747 822 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 LRP3O75074 770 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 STK10O94804 968 aaKnown RBP14.97□□□□□ -0.01
COL9A1-204ENST00000370496 CFIP05156 583 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 IGHV4-34P06331 123 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 SERPINF2P08697 491 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 RBP3P10745 1247 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 CES1P23141 567 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 PTPN3P26045 913 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 MAOBP27338 520 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 MAT2AP31153 395 aaKnown RBP14.97□□□□□ -0.01
COL9A1-204ENST00000370496 CCR5P51681 352 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 ELP6Q0PNE2 266 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 KLF1Q13351 362 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-204ENST00000370496 SETMARQ53H47 684 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-204ENST00000370496 KIAA1161Q6NSJ0 714 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 TRIM69Q86WT6 500 aa14.97□□□□□ -0.01
COL9A1-204ENST00000370496 SLC35F6Q8N357 371 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms