RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 SCN4BQ8IWT1 228 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 ZFP28Q8NHY6 868 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 KLHL5Q96PQ7 755 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 CDRT15Q96T59 188 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 FAM96AQ9H5X1 160 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 MT-CO1P00395 513 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 ODC1P11926 461 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 KCNA5P22460 613 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 GRIK1P39086 918 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 THPOP40225 353 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 ARCN1P48444 511 aaKnown RBP15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 THOP1P52888 689 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 MTTPP55157 894 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 SLC12A1Q13621 1099 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 CSHL1Q14406 222 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TXNDC5Q8NBS9 432 aaKnown RBP15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 GPR152Q8TDT2 470 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 STYXQ8WUJ0 223 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 SREK1Q8WXA9 508 aaKnown RBP15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TSPAN18Q96SJ8 248 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TNFRSF12AQ9NP84 129 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 PADI3Q9ULW8 664 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TBC1D30Q9Y2I9 924 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 DDHD2O94830 711 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 STMN1P16949 149 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 HOXC8P31273 242 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 DPP6P42658 865 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 CSRP3P50461 194 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 FAM171BQ6P995 826 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 AMIGO2Q86SJ2 522 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 HEXDCQ8WVB3 486 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 GPR78Q96P69 363 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 SENP6Q9GZR1 1112 aaPredicted RBP15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 TMEM165Q9HC07 324 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
SLC39A1-204ENST00000368623 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 TARM1B6A8C7 271 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 H3BSA7 217 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 TSPAN8P19075 237 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 FGFR3P22607 806 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 GPR15P49685 360 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 RAB10P61026 200 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 CDKL1Q00532 357 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 MAP7Q14244 749 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 NRF1Q16656 503 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 LINC00523Q86TU6 105 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 DSELQ8IZU8 1212 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 TDRKHQ9Y2W6 561 aaKnown RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 AAR2Q9Y312 384 aaKnown RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 B4GALT3O60512 393 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 DNAJA2O60884 412 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 GJB3O75712 270 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 CABYRO75952 493 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 CRTAMO95727 393 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 ITKQ08881 620 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 SH2D4BQ5SQS7 431 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 SCD5Q86SK9 330 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 C2orf69Q8N8R5 385 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 PPHLN1Q8NEY8 458 aaKnown RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 MRGPRX2Q96LB1 330 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 NPAS2Q99743 824 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 ACBD6Q9BR61 282 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 RTKNQ9BST9 563 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 SEMA6AQ9H2E6 1030 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 TCAF1Q9Y4C2 921 aa15.29■□□□□ 0.04
SLC39A1-204ENST00000368623 FOXD2O60548 495 aaPredicted RBP15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 HDCP19113 662 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 CCNCP24863 283 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 MYBPC1Q00872 1141 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 IHHQ14623 411 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 ARTNQ5T4W7 220 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 AAGABQ6PD74 315 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 ITFG2Q969R8 447 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 TMIGD2Q96BF3 282 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 TMA16Q96EY4 203 aaKnown RBP15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 FCRL5Q96RD9 977 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 OLFM1Q99784 485 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 MRPL1Q9BYD6 325 aaKnown RBP15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 POMKQ9H5K3 350 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 ABI2Q9NYB9 513 aaPredicted RBP15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 RRN3Q9NYV6 651 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 AP4B1Q9Y6B7 739 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 A0A1W2PQH9 124 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 IGLV3-25P01717 112 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 CTGFP29279 349 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 CCR1P32246 355 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 COG7P83436 770 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 MS4A2Q01362 244 aa15.28■□□□□ 0.04
SLC39A1-204ENST00000368623 FRG1Q14331 258 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms