RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SPAG17Q6Q759 2223 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 DOCK4Q8N1I0 1966 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 A0A0A6YYK5 440 aaPredicted RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 A0A1W2PR77 199 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 TLR4O00206 839 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SLC31A1O15431 190 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 INSIG1O15503 277 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 BUB1BO60566 1050 aaPredicted RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 MAGEC1O60732 1142 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 NDUFA10O95299 355 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CER1O95813 267 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 PEX11BO96011 259 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 PAK4O96013 591 aaPredicted RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 WNT1P04628 370 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CEACAM1P13688 526 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CD59P13987 128 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 TIMP2P16035 220 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CDC25BP30305 580 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 GJC1P36383 396 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CTSKP43235 329 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SUOXP51687 545 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 POLR2LP62875 67 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 RPS21P63220 83 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 SLC10A7Q0GE19 358 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 OVGP1Q12889 678 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 ZNF284Q2VY69 593 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 PPM1JQ5JR12 505 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 MARC1Q5VT66 337 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 KIAA1161Q6NSJ0 714 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 DBX2Q6ZNG2 339 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 PIP4P1Q86T03 277 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 IQCHQ86VS3 1027 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 ZSCAN30Q86W11 494 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 VSIG1Q86XK7 387 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 RHOT1Q8IXI2 618 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 OR2I1PQ8NGU4 316 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 ASB12Q8WXK4 309 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 RAPGEF5Q92565 580 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 FAF2Q96CS3 445 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 EXOC2Q96KP1 924 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CALR3Q96L12 384 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 RNF157Q96PX1 679 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 TUBGCP5Q96RT8 1024 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 CINPQ9BW66 212 aaPredicted RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SLC32A1Q9H598 525 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SEPT3Q9UH03 358 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 ZFR2Q9UPR6 939 aaKnown RBP9.97□□□□□ -0.81
CD48-202ENST00000368046 PCDHGA10Q9Y5H3 936 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 HS3ST3A1Q9Y663 406 aa9.97□□□□□ -0.81
CD48-202ENST00000368046 SOWAHDA6NJG2 315 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 ZNF487B1APH4 448 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 NEMP1O14524 444 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 KCNK3O14649 394 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 AREL1O15033 823 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 MATN3O15232 486 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 CCNCP24863 283 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 AKT2P31751 481 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 HSPA9P38646 679 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 RGRP47804 291 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 SCNN1BP51168 640 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 BCL2L1Q07817 233 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 SGCGQ13326 291 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 HNRNPDQ14103 355 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 IFI16Q16666 785 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 UGP2Q16851 508 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 ZNF423Q2M1K9 1284 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 NCBP2-AS2Q69YL0 99 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 CAMK1DQ8IU85 385 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 ATPAF2Q8N5M1 289 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 PQLC3Q8N755 202 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 KLK6Q92876 244 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 TSGA13Q96PP4 275 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 LENG8Q96PV6 779 aaPredicted RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 MAK16Q9BXY0 300 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 ATP13A3Q9H7F0 1226 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 ERVMER34-1Q9H9K5 563 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 IL21RQ9HBE5 538 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 TM7SF3Q9NS93 570 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 DDX56Q9NY93 547 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 PCDHGB2Q9Y5G2 931 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 TNRC6BQ9UPQ9 1833 aaKnown RBP9.96□□□□□ -0.82
CD48-202ENST00000368046 LAMA1P25391 3075 aa9.96□□□□□ -0.82
CD48-202ENST00000368046 RALGAPA1Q6GYQ0 2036 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 NUP205Q92621 2012 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 CEP250Q9BV73 2442 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.95□□□□□ -0.82
CD48-202ENST00000368046 LRRD1A4D1F6 860 aa9.95□□□□□ -0.82
CD48-202ENST00000368046 IGLON5A6NGN9 336 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms