RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 GPR78Q96P69 363 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 MCMBPQ9BTE3 642 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
PRKN-205ENST00000366897 FAM49AQ9H0Q0 323 aaPredicted RBP13.71□□□□□ -0.21
PRKN-205ENST00000366897 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.21
PRKN-205ENST00000366897 PNPLA3Q9NST1 481 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 SMOXQ9NWM0 555 aa13.71□□□□□ -0.21
PRKN-205ENST00000366897 CAPNS1P04632 268 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 C8BP07358 591 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 CHRM3P20309 590 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 CSE1LP55060 971 aaKnown RBP13.71□□□□□ -0.22
PRKN-205ENST00000366897 LRP8Q14114 963 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 PRPSAP1Q14558 356 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 HERC3Q15034 1050 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 NOMO2Q5JPE7 1267 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 RBM20Q5T481 1227 aaKnown RBP13.71□□□□□ -0.22
PRKN-205ENST00000366897 RIOX2Q8IUF8 465 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 RBM12BQ8IXT5 1001 aaKnown RBP13.71□□□□□ -0.22
PRKN-205ENST00000366897 ISOC1Q96CN7 298 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 TXNRD2Q9NNW7 524 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 VTI1BQ9UEU0 232 aa13.71□□□□□ -0.22
PRKN-205ENST00000366897 UBDO15205 165 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 GPC4O75487 556 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 ATE1O95260 518 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 CD247P20963 164 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 LRPAP1P30533 357 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 SNX16P57768 344 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 FKBP1BP68106 108 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 RFTN1Q14699 578 aaPredicted RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 PAFAH1B3Q15102 231 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 RGMBQ6NW40 437 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 EDEM1Q92611 657 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 FBXL20Q96IG2 436 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 GBA3Q9H227 469 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 CLK4Q9HAZ1 481 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 CDHR5Q9HBB8 845 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 MID2Q9UJV3 735 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 TRIM24O15164 1050 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 HSPA1AP0DMV8 641 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 HSPA1BP0DMV9 641 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 STMN1P16949 149 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 ZNF157P51786 506 aaPredicted RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 SEPT6Q14141 434 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 CAPRIN1Q14444 709 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 GPR107Q5VW38 600 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 ARHGAP17Q68EM7 881 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 TTC33Q6PID6 262 aaPredicted RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 SPPL2CQ8IUH8 684 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 GIPC3Q8TF64 312 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 CYGBQ8WWM9 190 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 EXT2Q93063 718 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 PAIP1Q9H074 479 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 ERAP1Q9NZ08 941 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
PRKN-205ENST00000366897 PPP2R3BQ9Y5P8 575 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 V9GYQ6 96 aa13.7□□□□□ -0.22
PRKN-205ENST00000366897 APOA4P06727 396 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 ADRA1BP35368 520 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 CHRNA4P43681 627 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 MAP3K7CLP57077 242 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 RAB10P61026 200 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 CREB5Q02930 508 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 C9orf57Q5W0N0 161 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 ZNF470Q6ECI4 717 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 PELI3Q8N2H9 469 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 ZNF419Q96HQ0 510 aaPredicted RBP13.69□□□□□ -0.22
PRKN-205ENST00000366897 ZIC5Q96T25 663 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 NPY6RQ99463 290 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 NCKIPSDQ9NZQ3 722 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 YJEFN3A6XGL0 299 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 CCL22O00626 93 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 LGALS2P05162 132 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
PRKN-205ENST00000366897 SLC1A2P43004 574 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 ADRM1Q16186 407 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 DHFR2Q86XF0 187 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 DOCK1Q14185 1865 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 FYNP06241 537 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 ARNTP27540 789 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 SLC7A1P30825 629 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 CDH13P55290 713 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 FAM187BQ17R55 369 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 LDB1Q86U70 411 aaPredicted RBP13.69□□□□□ -0.22
PRKN-205ENST00000366897 OSTM1Q86WC4 334 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 IFNEQ86WN2 208 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 EPHX4Q8IUS5 362 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 EXOC8Q8IYI6 725 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms