RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CSF2P04141 144 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MYBL1P10243 752 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 DESP17661 470 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ERCC2P18074 760 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ITIH2P19823 946 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PCK1P35558 622 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RABIFP47224 123 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 PAPOLAP51003 745 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RAD51Q06609 339 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ACAP1Q15027 740 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RFX8Q6ZV50 586 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 TTC7BQ86TV6 843 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CACTIN-AS1Q8N1I8 211 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 RFFLQ8WZ73 363 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 ARHGEF26Q96DR7 871 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 UBA2Q9UBT2 640 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 KLF15Q9UIH9 416 aa13.84□□□□□ -0.19
TNFRSF1A-202ENST00000366159 LY6G6EA0A0G2JKS1 128 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 EEF2KO00418 725 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FPGTO14772 594 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BUB1BO60566 1050 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RNF8O76064 485 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NME1P15531 152 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IL1R2P27930 398 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RGRP47804 291 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CSNK1DP48730 415 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SUOXP51687 545 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF135P52742 658 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CLDN6P56747 220 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SGCGQ13326 291 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DPYSQ14117 519 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TMEM52BQ4KMG9 183 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 KDM7AQ6ZMT4 941 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NPWQ8N729 165 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PDCD7Q8N8D1 485 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SUV39H2Q9H5I1 410 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MRPL47Q9HD33 250 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CWC15Q9P013 229 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CAPN11Q9UMQ6 739 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BZW2Q9Y6E2 419 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SCINQ9Y6U3 715 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 U3KQA8 63 aa13.83□□□□□ -0.2
TNFRSF1A-202ENST00000366159 APC2O95996 2303 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GOLGA4Q13439 2230 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SCAMP1O15126 338 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PRPSAP2O60256 369 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MMP20O60882 483 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PIGNO95427 931 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CKMT1AP12532 417 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TCF4P15884 667 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IGFALSP35858 605 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 UBASH3AP57075 661 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 HNRNPKP61978 463 aaKnown RBP eCLIP13.82□□□□□ -0.29e-7■■□□□ 13.3
TNFRSF1A-202ENST00000366159 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 EIF2B5Q13144 721 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GRM3Q14832 879 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 AGERQ15109 404 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DPYSL2Q16555 572 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 UGP2Q16851 508 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CCDC157Q569K6 752 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF542PQ5EBM4 170 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LRRC73Q5JTD7 316 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ARHGAP36Q6ZRI8 547 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TP53INP2Q8IXH6 220 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TP53I13Q8NBR0 393 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TUBGCP5Q96RT8 1024 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MBNL1Q9NR56 388 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NLGN3Q9NZ94 848 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NENFQ9UMX5 172 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GPSM3Q9Y4H4 160 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FAM208BQ5VWN6 2430 aa13.82□□□□□ -0.2
TNFRSF1A-202ENST00000366159 KNTC1P50748 2209 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TDRD6O60522 2096 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NEMP1O14524 444 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TOR1BO14657 336 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TM7SF2O76062 418 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PEX11BO96011 259 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 YPEL5P62699 121 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZBED6P86452 979 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 INSM1Q01101 510 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IL10RBQ08334 325 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PDE1CQ14123 709 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PARGQ86W56 976 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZSWIM9Q86XI8 627 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms