RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ASB8Q9H765 288 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 MORF4L1Q9UBU8 362 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 STOML2Q9UJZ1 356 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ZCCHC11Q5TAX3 1644 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 TISP43B9A030 160 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 HNRNPLP14866 589 aaKnown RBP eCLIP16.15■□□□□ 0.181e-9■■■■■ 73.3
COL18A1-203ENST00000359759 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ATP5F1P24539 256 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 TTC23Q5W5X9 447 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF613Q6PF04 617 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 CREG2Q8IUH2 290 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 C10orf107Q8IVU9 208 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PPP1R13LQ8WUF5 828 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 C1QTNF1Q9BXJ1 281 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 POLR1EQ9GZS1 481 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 DCDC2CA8MYV0 355 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 TCAIMQ8N3R3 496 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 NETO2Q8NC67 525 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 C3orf18Q9UK00 162 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 AP4B1Q9Y6B7 739 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 RGSL1A5PLK6 1076 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 CASKO14936 926 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SGTAO43765 313 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SLC28A2O43868 658 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 CTSEP14091 401 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 TAS2R41P59536 307 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 PGM5Q15124 567 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 FBXL19Q6PCT2 694 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ZDHHC17Q8IUH5 632 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 STAG3L4Q8TBR4 150 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 PTCD3Q96EY7 689 aaKnown RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 RAB21Q9UL25 225 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ATP6AP2A0A1C7CYW4 349 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 C2orf71A6NGG8 1288 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 HOXA2O43364 376 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ATP6AP2O75787 350 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 INSRRP14616 1297 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 EPHA3P29320 983 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 DLG4P78352 724 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ST3GAL1Q11201 340 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 CXorf57Q6NSI4 855 aaKnown RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 C4orf19Q8IY42 314 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 KLHL23Q8NBE8 558 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 RMI1Q9H9A7 625 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 CPA4Q9UI42 421 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SNX3O60493 162 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 NADKO95544 446 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 GALK1P51570 392 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 GALNT3Q14435 633 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 RAP1GAP2Q684P5 730 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF554Q86TJ5 538 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 DEPDC4Q8N2C3 294 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 VANGL1Q8TAA9 524 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 CYP2W1Q8TAV3 490 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 MNTQ99583 582 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ACSS2Q9NR19 701 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 TMPRSS4Q9NRS4 437 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 GTPBP1O00178 669 aaKnown RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 TPD52L2O43399 206 aaKnown RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 NTSR2O95665 410 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 HGFP14210 728 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 GTF2A2P52657 109 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 NRG1Q02297 640 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SLC45A4Q5BKX6 768 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 NEPROQ6NW34 567 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 GALNTL5Q7Z4T8 443 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 MEIOBQ8N635 442 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 AP3S1Q92572 193 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 FCRL4Q96PJ5 515 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 POLR3HQ9Y535 204 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 A0A088AWK7 358 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 A8MUI8 341 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF10P21506 573 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SEPHS1P49903 392 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 PCID2Q5JVF3 399 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 SLC34A3Q8N130 599 aa16.14■□□□□ 0.17
COL18A1-203ENST00000359759 H0Y858 1186 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 SNAP91O60641 907 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 STXBP1P61764 594 aaKnown RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 CLK4Q9HAZ1 481 aaKnown RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 PNPLA3Q9NST1 481 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 THG1LQ9NWX6 298 aaKnown RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF224Q9NZL3 707 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 NCKAP1Q9Y2A7 1128 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 BMP7P18075 431 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TFEBP19484 476 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TLX1P31314 330 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 MAGEC3Q8TD91 643 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 POPDC2Q9HBU9 364 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TNPO3Q9Y5L0 923 aaKnown RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 SIN3BO75182 1162 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TIPRLO75663 272 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 PIRTP0C851 137 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 FAM183BPQ6ZVS7 135 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms