RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SLC25A23Q9BV35 468 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 OSBPL11Q9BXB4 747 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 DGCR6LQ9BY27 220 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 RHOBTB2Q9BYZ6 727 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CLK4Q9HAZ1 481 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SP110Q9HB58 689 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 PNPLA3Q9NST1 481 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MTMR10Q9NXD2 777 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NSMCE4AQ9NXX6 385 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MPP6Q9NZW5 540 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 FOCADQ5VW36 1801 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 A0A087WXM4 84 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MAGEB16A2A368 324 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 BOLA2-SMG1P6H3BVE0 249 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 DPYSL4O14531 572 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NRP1O14786 923 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MTSS1O43312 755 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 FBXO21O94952 628 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 LINC00032P0C843 101 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MTHFD1P11586 935 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 PRDX6P30041 224 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 CCR1P32246 355 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 IREB2P48200 963 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SLC26A2P50443 739 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 NUP107P57740 925 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 MYBPC3Q14896 1274 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 TBC1D25Q3MII6 688 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ARHGAP36Q6ZRI8 547 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 TRPC4APQ8TEL6 797 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 ZBTB26Q9HCK0 441 aa6.63□□□□□ -1.35
CSDE1-203ENST00000358528 SEMA4BQ9NPR2 832 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 AAR2Q9Y312 384 aaKnown RBP6.63□□□□□ -1.35
CSDE1-203ENST00000358528 A0A0J9YVX5 310 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 DHRS12A0PJE2 317 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 OR51F1A6NGY5 319 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ASB14A6NK59 587 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PTGES3LE9PB15 166 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 J3QRK9 145 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PLSCR1O15162 318 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ANXA9O76027 345 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 LRIG2O94898 1065 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 OCM2P0CE71 109 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 OCMP0CE72 109 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 BDNFP23560 247 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 C21orf59P57076 290 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 INCA1Q0VD86 236 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ITGADQ13349 1161 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 IKBKEQ14164 716 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 DCAF4L1Q3SXM0 396 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PIGGQ5H8A4 983 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SH3D19Q5HYK7 790 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PCID2Q5JVF3 399 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PIWIL4Q7Z3Z4 852 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ZC3HC1Q86WB0 502 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CEP97Q8IW35 865 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 DHRSXQ8N5I4 330 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TXNDC5Q8NBS9 432 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 FBXL8Q96CD0 374 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 NRBF2Q96F24 287 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HSFY1Q96LI6 401 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 KLHL5Q96PQ7 755 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HBEGFQ99075 208 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 BEGAINQ9BUH8 593 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 C1orf50Q9BV19 199 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ZDHHC7Q9NXF8 308 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CNOT6Q9ULM6 557 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 FAM50BQ9Y247 325 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ANKRD6Q9Y2G4 727 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 NDUFAF1Q9Y375 327 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TRAF6Q9Y4K3 522 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SMIM28A0A1B0GU29 152 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 MSI1O43347 362 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GRID2O43424 1007 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 BCAS2O75934 225 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TOMM70O94826 608 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 C1QAP02745 245 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SMIM18P0DKX4 95 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HSPA1AP0DMV8 641 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HSPA1BP0DMV9 641 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CDK4P11802 303 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CHRM3P20309 590 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SLC5A2P31639 672 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SLC1A2P43004 574 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 KCNK10P57789 538 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 LSM3P62310 102 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CDK18Q07002 472 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PERM1Q5SV97 790 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 STK32CQ86UX6 486 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 FAM35AQ86V20 835 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 UNC93AQ86WB7 457 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 MTMR14Q8NCE2 650 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 KHSRPQ92945 711 aaKnown RBP eCLIP6.62□□□□□ -1.352e-7■■■■□ 20
CSDE1-203ENST00000358528 ESAMQ96AP7 390 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CPA4Q9UI42 421 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TRHDEQ9UKU6 1024 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TIMM22Q9Y584 194 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms