RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 NIPA2Q8N8Q9 360 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ADAMTS16Q8TE57 1224 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 HERVK_113Q902F9 699 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C7orf26Q96N11 449 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PAFAH2Q99487 392 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ACO2Q99798 780 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 AGPAT1Q99943 283 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C2orf49Q9BVC5 232 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FTHL17Q9BXU8 183 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FRMD8Q9BZ67 464 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GPR88Q9GZN0 384 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PRDM12Q9H4Q4 367 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ELAC1Q9H777 363 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FKBP14Q9NWM8 211 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FNIP2Q9P278 1114 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CPSF3Q9UKF6 684 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GTF3C4Q9UKN8 822 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DSEQ9UL01 958 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SORCS3Q9UPU3 1222 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ST14Q9Y5Y6 855 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KIAA1671Q9BY89 1806 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 LOC100653049A0A140TA62 436 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ILVBLA1L0T0 632 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DENND3A2RUS2 1198 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C7orf72A4D263 438 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C9orf172C9J069 976 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KBTBD13C9JR72 458 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 M0QZ92 97 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FOXN3O00409 490 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DYNC1LI2O43237 492 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KRT34O76011 436 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DDHD2O94830 711 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MT-ND3P03897 115 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 LGALS2P05162 132 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CYP1A2P05177 515 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MMP3P08254 477 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MSL3P1P0C860 447 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ZNF26P17031 533 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ITGAXP20702 1163 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ACAT1P24752 427 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KLRC2P26717 231 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ADSSP30520 456 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SSTR1P30872 391 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 BMPR1AP36894 532 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GNL1P36915 607 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 NR4A2P43354 598 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KRT6CP48668 564 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GPX6P59796 221 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 EIF3EP60228 445 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ATP6V0D1P61421 351 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DLG4P78352 724 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 TMPRSS15P98073 1019 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CHRNEQ04844 493 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GALNT2Q10471 571 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 RALGDSQ12967 914 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PEX6Q13608 980 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 RAB30Q15771 203 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ARHGAP44Q17R89 818 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CCDC142Q17RM4 750 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DUOXA2Q1HG44 320 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PGS1Q32NB8 556 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CDONQ4KMG0 1287 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PPP6R3Q5H9R7 873 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CEP78Q5JTW2 689 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 FAM102BQ5T8I3 360 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SWSAP1Q6NVH7 229 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CYP4V2Q6ZWL3 525 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 POLNQ7Z5Q5 900 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 BTLAQ7Z6A9 289 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 CARM1Q86X55 608 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 GALNT13Q8IUC8 556 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ARRDC4Q8NCT1 418 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 LMO3Q8TAP4 145 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ZNF420Q8TAQ5 688 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ZNF564Q8TBZ8 553 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 HM13Q8TCT9 377 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SLC20A1Q8WUM9 679 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 KBTBD7Q8WVZ9 684 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PGBD4Q96DM1 585 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ZNF486Q96H40 463 aaPredicted RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SPATA33Q96N06 139 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 DOK1Q99704 481 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PKP2Q99959 881 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 TMEM79Q9BSE2 394 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MECRQ9BV79 373 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 HEMGNQ9BXL5 484 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 BCO2Q9BYV7 579 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 C20orf27Q9GZN8 174 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 HOXD1Q9GZZ0 328 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 NAA50Q9GZZ1 169 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 ZHX3Q9H4I2 956 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 MOV10Q9HCE1 1003 aaKnown RBP4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PNPLA3Q9NST1 481 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 NDFIP2Q9NV92 336 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 RAB20Q9NX57 234 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 BCAP29Q9UHQ4 241 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 PACSIN3Q9UKS6 424 aa4.04□□□□□ -1.76
CNGA1-201ENST00000358519 SLC8A2Q9UPR5 921 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms