RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 NARFQ9UHQ1 456 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TBC1D30Q9Y2I9 924 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 GSAPA4D1B5 854 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 GNB5O14775 395 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TBX10O75333 385 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ZSCAN5DPP0CG00 497 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TAF6P49848 677 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ORC1Q13415 861 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ACAP2Q15057 778 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 C15orf59Q2T9L4 293 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 METTL21CQ5VZV1 264 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ARHGEF33A8MVX0 844 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 NRP2O60462 931 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 IFI30P13284 250 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ITIH1P19827 911 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 FGFR2P21802 821 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 MYL9P24844 172 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ELP6Q0PNE2 266 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 CES3Q6UWW8 571 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 CAB39LQ9H9S4 337 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 PLCL2Q9UPR0 1127 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 A0A087WZ62 844 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 UPP2O95045 317 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ARL3P36405 182 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 RENBPP51606 427 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 CDH18Q13634 790 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 NODALQ96S42 347 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ALG9Q9H6U8 611 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 IFT80Q9P2H3 777 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 CYBBP04839 570 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 GPIP06744 558 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ODC1P11926 461 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 FAUP35544 74 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 MTMR2Q13614 643 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 SLC44A1Q8WWI5 657 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 GPN1Q9HCN4 374 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 SNX15Q9NRS6 342 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 PHF11Q9UIL8 331 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 KIDINS220Q9ULH0 1771 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 USP20Q9Y2K6 914 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 SIGLEC16A6NMB1 481 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ITGALP20701 1170 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 MSX2P35548 267 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 ZBED5Q49AG3 693 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 NADK2Q4G0N4 442 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ATP6V0D2Q8N8Y2 350 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 SERAC1Q96JX3 654 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TDRD3Q9H7E2 651 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 PTPRHQ9HD43 1115 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 EGFL7Q9UHF1 273 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 LSM7Q9UK45 103 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 NUP50Q9UKX7 468 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 KIF13BQ9NQT8 1826 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 AGLP35573 1532 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 BTN3A1O00481 513 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TULP3O75386 442 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 RPS9P46781 194 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 AMHR2Q16671 573 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ANO7Q6IWH7 933 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 ALKBH2Q6NS38 261 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 VN1R5Q7Z5H4 357 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 MILR1Q7Z6M3 343 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 TDRPQ86YL5 185 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 STAG3L4Q8TBR4 150 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 HELQQ8TDG4 1101 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 EBNA1BP2Q99848 306 aaKnown RBP8.83□□□□□ -1
COL6A6-201ENST00000358511 CRISPLD1Q9H336 500 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 IGSF9Q9P2J2 1179 aa8.83□□□□□ -1
COL6A6-201ENST00000358511 PRKD3O94806 890 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 HNMTP50135 292 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 DPY19L2Q6NUT2 758 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 USP43Q70EL4 1123 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 MED8Q96G25 268 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 VPS35Q96QK1 796 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 CATSPERZQ9NTU4 200 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 DAGLAQ9Y4D2 1042 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 A0A0G2JPF8 293 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 HNRNPCL3B7ZW38 293 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 BANF1O75531 89 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ZNF806P0C7X5 589 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 HNRNPCL4P0DMR1 293 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 GUCA1AP43080 201 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 INSCQ1MX18 579 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SPAG16Q8N0X2 631 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 EEF1AKMT1Q8WVE0 214 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 HSPBAP1Q96EW2 488 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ZNF512Q96ME7 567 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 ERVK-5Q9HDB9 667 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 AHSPQ9NZD4 102 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 AIREO43918 545 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PSIP1O75475 530 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 FYNP06241 537 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms