RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MTG1Q9BT17 334 aaPredicted RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 NUF2Q9BZD4 464 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 FARSBQ9NSD9 589 aaKnown RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 GIN1Q9NXP7 522 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 SELENONQ9NZV5 590 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 EXOC1LA0A1B0GW35 172 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 CCDC66A2RUB6 948 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 E7ENX8 843 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 INO80B-WBP1J3KQ70 363 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 DNALI1O14645 258 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 PAPSS2O95340 614 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 CAPNS1P04632 268 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 FOSL2P15408 326 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 PTNP21246 168 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MGAT1P26572 445 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 GNAQP50148 359 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 FZD5Q13467 585 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 LPIN1Q14693 890 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 CATSPEREQ5SY80 951 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 NANOGP8Q6NSW7 305 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MAB21L3Q8N8X9 362 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 INO80BQ9C086 356 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 OLAHQ9NV23 265 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 SIRPGQ9P1W8 387 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 DNAJB4Q9UDY4 337 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 POMPQ9Y244 141 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 BTBD3Q9Y2F9 522 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MAFBQ9Y5Q3 323 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 ZGRF1Q86YA3 2104 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 B2RBV5 119 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 ATE1O95260 518 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 TGFB3P10600 412 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 PRKACGP22612 351 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 CALB2P22676 271 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 WEE1P30291 646 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 HK3P52790 923 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 CYP27C1Q4G0S4 372 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 FSTL4Q6MZW2 842 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MILR1Q7Z6M3 343 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MEX3DQ86XN8 651 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 MAML2Q8IZL2 1156 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 SLC35F5Q8WV83 523 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 SNRNP27Q8WVK2 155 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 LUC7LQ9NQ29 371 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 SYBUQ9NX95 663 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 RBMX2Q9Y388 322 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 STYXL1Q9Y6J8 313 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 TOR1BO14657 336 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MICAL2O94851 1124 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 LYNP07948 512 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 CDK4P11802 303 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MCL1Q07820 350 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 NSUN2Q08J23 767 aaKnown RBP eCLIP5.71□□□□□ -1.5
CD47-201ENST00000355354 EMC2Q15006 297 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 ARL13AQ5H913 290 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 ZFYVE27Q5T4F4 411 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 IL23RQ5VWK5 629 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 YTHDF3Q7Z739 585 aaKnown RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 COMTD1Q86VU5 262 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 ZNF567Q8N184 647 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 MYO1HQ8N1T3 1032 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 TMEM199Q8N511 208 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 C12orf50Q8NA57 414 aaPredicted RBP5.71□□□□□ -1.5
CD47-201ENST00000355354 CIB1Q99828 191 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 C1QTNF1Q9BXJ1 281 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 POLE4Q9NR33 117 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 VNN3Q9NY84 501 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 PCDHB4Q9Y5E5 795 aa5.71□□□□□ -1.5
CD47-201ENST00000355354 GOLGA6L7A0A1B0GV03 622 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 ABHD14A-ACY1A0A1B0GW23 586 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 HMGB1P1B2RPK0 211 aaPredicted RBP5.7□□□□□ -1.5
CD47-201ENST00000355354 GYG2O15488 501 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 PQBP1O60828 265 aaKnown RBP5.7□□□□□ -1.5
CD47-201ENST00000355354 CD160O95971 181 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 SLC35E2BP0CK96 405 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 RPL17P18621 184 aaKnown RBP5.7□□□□□ -1.5
CD47-201ENST00000355354 GDF5P43026 501 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 HTR6P50406 440 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 NHLH1Q02575 133 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 MBLAC2Q68D91 279 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 MBOAT1Q6ZNC8 495 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 NCAPG2Q86XI2 1143 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 NDUFAF2Q8N183 169 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 FRMD1Q8N878 549 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 SLC2A14Q8TDB8 520 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 SLC22A17Q8WUG5 538 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 PTCD2Q8WV60 388 aaKnown RBP5.7□□□□□ -1.5
CD47-201ENST00000355354 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 FAM20AQ96MK3 541 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 CCDC106Q9BWC9 280 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 SLC2A11Q9BYW1 496 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 ZNF518BQ9C0D4 1074 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 DONSONQ9NYP3 566 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 MOCS1Q9NZB8 636 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 BICDL2A1A5D9 508 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 SDR42E2A6NKP2 422 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 K7ERI5 159 aa5.7□□□□□ -1.5
CD47-201ENST00000355354 K7ERQ8 282 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms