RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TSPY1Q01534 308 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 DEUP1Q05D60 604 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ZNF33AQ06730 810 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 MESP2Q0VG99 397 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 DPYSQ14117 519 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 KLHL38Q2WGJ6 581 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 KRTAP21-3Q3LHN1 58 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 CCDC38Q502W7 563 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 PPP6R3Q5H9R7 873 aaPredicted RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 OVOS1Q6IE37 1185 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 C4orf50Q6ZRC1 276 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ANKS3Q6ZW76 656 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 TADA2BQ86TJ2 420 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 EXOC3L1Q86VI1 746 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ZC3H18Q86VM9 953 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 NLRP14Q86W24 1093 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 TMPRSS12Q86WS5 348 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ZBED8Q8IZ13 594 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 CNPY4Q8N129 248 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 THEM5Q8N1Q8 247 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 RNF139Q8WU17 664 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 MAML1Q92585 1016 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ARHGEF2Q92974 986 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 XPO6Q96QU8 1125 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 DHRS4Q9BTZ2 278 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ACSS3Q9H6R3 686 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 EIF2B3Q9NR50 452 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 PIGVQ9NUD9 493 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 TMEM30AQ9NV96 361 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 DNAJC17Q9NVM6 304 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 XPO7Q9UIA9 1087 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 MMP17Q9ULZ9 603 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 KNL1Q8NG31 2342 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 MYO16Q9Y6X6 1858 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 ADGRG4Q8IZF6 3080 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 EXOC1LA0A1B0GW35 172 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GMNCA6NCL1 334 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SMIM23A6NLE4 172 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 YJEFN3A6XGL0 299 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 E7ENQ6 273 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 NDUFAB1O14561 156 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SYN3O14994 580 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 PRPF4O43172 522 aaKnown RBP eCLIP8.37□□□□□ -1.07
CD44-205ENST00000352818 SUV39H1O43463 412 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 BRINP1O60477 761 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 IGLV3-25P01717 112 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CHN1P15882 459 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GOT1P17174 413 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GCAP28676 217 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 RBL1P28749 1068 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 ADRA1BP35368 520 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 FDFT1P37268 417 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 MAGEA3P43357 314 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CXCR3P49682 368 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SEC13P55735 322 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GPX6P59796 221 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 PITX1P78337 314 aaPredicted RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 BASP1P80723 227 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 CDK16Q00536 496 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 RPL6Q02878 288 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 GBE1Q04446 702 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SEMA5AQ13591 1074 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 FASTKD3Q14CZ7 662 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 PDK1Q15118 436 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 PLEKHG6Q3KR16 790 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CCDC157Q569K6 752 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 FNBP1LQ5T0N5 605 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GPR158Q5T848 1215 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SYPL2Q5VXT5 272 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 KIAA1614Q5VZ46 1190 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 VSTM1Q6UX27 236 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 B4GALNT4Q76KP1 1039 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GPRIN1Q7Z2K8 1008 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 TRABD2AQ86V40 505 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 FAM131BQ86XD5 332 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CCDC13Q8IYE1 715 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 OR10T2Q8NGX3 314 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 ZNF473Q8WTR7 871 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 PYROXD1Q8WU10 500 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 TFB1MQ8WVM0 346 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 LIN37Q96GY3 246 aaPredicted RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
CD44-205ENST00000352818 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SPATA13Q96N96 652 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CCT8L2Q96SF2 557 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 CDC6Q99741 560 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 SELENOSQ9BQE4 189 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms