RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OSCP1Q8WVF1 389 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 FGF13Q92913 245 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 CENPTQ96BT3 561 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 ASB16Q96NS5 453 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 CPNE1Q99829 537 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 TDRD1Q9BXT4 1180 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 INTS9Q9NV88 658 aaKnown RBP18.85■□□□□ 0.61
PTN-201ENST00000348225 NKIRAS1Q9NYS0 192 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 GGA2Q9UJY4 613 aa18.85■□□□□ 0.61
PTN-201ENST00000348225 A0A1W2PPM1 405 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 TRIM49D1C9J1S8 452 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 PRPF4O43172 522 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTN-201ENST00000348225 UGT1A9O60656 530 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 FAM155BO75949 473 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 PAPSS2O95340 614 aaPredicted RBP18.84■□□□□ 0.61
PTN-201ENST00000348225 PABPC1P11940 636 aaKnown RBP18.84■□□□□ 0.61
PTN-201ENST00000348225 HOXB8P17481 243 aaPredicted RBP18.84■□□□□ 0.61
PTN-201ENST00000348225 KRT4P19013 534 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 GP5P40197 560 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 MAPK8P45983 427 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 SULT2A1Q06520 285 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 GALNT3Q14435 633 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 FAM78AQ5JUQ0 283 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 KIAA0930Q6ICG6 404 aaPredicted RBP18.84■□□□□ 0.61
PTN-201ENST00000348225 PACS1Q6VY07 963 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 MDM1Q8TC05 714 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 BPIFB1Q8TDL5 484 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 TRIB3Q96RU7 358 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 APOL5Q9BWW9 433 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 UGT1A7Q9HAW7 530 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 UGT1A10Q9HAW8 530 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 UGT1A8Q9HAW9 530 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 OBP2AQ9NY56 170 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 SLC25A13Q9UJS0 675 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 INTS6Q9UL03 887 aaKnown RBP18.84■□□□□ 0.61
PTN-201ENST00000348225 RAI2Q9Y5P3 530 aa18.84■□□□□ 0.61
PTN-201ENST00000348225 FAM47DPA6NHR8 397 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 ADH1CP00326 375 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 MT-CO1P00395 513 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 SLC18A1P54219 525 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 DNAJC3Q13217 504 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 FUT11Q495W5 492 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 HSP90AA5PQ58FG0 334 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 TSTD2Q5T7W7 516 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 GRTP1Q5TC63 336 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 TTC19Q6DKK2 380 aaPredicted RBP18.83■□□□□ 0.61
PTN-201ENST00000348225 SRLQ86TD4 932 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 C4orf33Q8N1A6 199 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 GABPB2Q8TAK5 448 aaPredicted RBP18.83■□□□□ 0.61
PTN-201ENST00000348225 ZNF778Q96MU6 729 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 ADGRE3Q9BY15 652 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 TREX1Q9NSU2 369 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 IL1RAPL1Q9NZN1 696 aa18.83■□□□□ 0.61
PTN-201ENST00000348225 CCDC78A2IDD5 438 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 LINC01565O15544 149 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 IGSF6O95976 241 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 VIPR2P41587 438 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 CSNK1DP48730 415 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 MSLNQ13421 630 aaPredicted RBP18.82■□□□□ 0.6
PTN-201ENST00000348225 DHCR24Q15392 516 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 TEDDM1Q5T9Z0 273 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 ESRP1Q6NXG1 681 aaKnown RBP18.82■□□□□ 0.6
PTN-201ENST00000348225 SYCE2Q6PIF2 218 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTN-201ENST00000348225 PEX13Q92968 403 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 RMDN1Q96DB5 314 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 TRPV4Q9HBA0 871 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 IARS2Q9NSE4 1012 aaKnown RBP18.82■□□□□ 0.6
PTN-201ENST00000348225 CHKBQ9Y259 395 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 HS3ST2Q9Y278 367 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 MYOFQ9NZM1 2061 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
PTN-201ENST00000348225 K7ERQ8 282 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 NFATC1O95644 943 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 ADH5P11766 374 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 LSP1P33241 339 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 PPARDQ03181 441 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 EML3Q32P44 896 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 AHI1Q8N157 1196 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 ANKRD42Q8N9B4 389 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 BRSK1Q8TDC3 778 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 BLOC1S5Q8TDH9 187 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 RSPRY1Q96DX4 576 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 SGSM3Q96HU1 749 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 LRRC3BQ96PB8 259 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 FAM167BQ9BTA0 163 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 THG1LQ9NWX6 298 aaKnown RBP18.82■□□□□ 0.6
PTN-201ENST00000348225 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTN-201ENST00000348225 LMCD1Q9NZU5 365 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 SLC17A6Q9P2U8 582 aa18.82■□□□□ 0.6
PTN-201ENST00000348225 MROH6A6NGR9 719 aa18.81■□□□□ 0.6
PTN-201ENST00000348225 SRRM3A6NNA2 597 aaPredicted RBP18.81■□□□□ 0.6
PTN-201ENST00000348225 ANKRD36A6QL64 1941 aa18.81■□□□□ 0.6
PTN-201ENST00000348225 HOXC11O43248 304 aaPredicted RBP18.81■□□□□ 0.6
PTN-201ENST00000348225 SMAD6O43541 496 aaKnown RBP18.81■□□□□ 0.6
PTN-201ENST00000348225 SPAG7O75391 227 aa18.81■□□□□ 0.6
PTN-201ENST00000348225 VAPBO95292 243 aa18.81■□□□□ 0.6
PTN-201ENST00000348225 CYP17A1P05093 508 aa18.81■□□□□ 0.6
PTN-201ENST00000348225 SPRP35270 261 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms