RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 COL9A1P20849 921 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 CES1P23141 567 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 MRPS21P82921 87 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 DENND5AQ6IQ26 1287 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 CCNI2Q6ZMN8 369 aaPredicted RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 Q6ZS52 159 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 CAND1Q86VP6 1230 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 HOOK3Q86VS8 718 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TXNDC5Q8NBS9 432 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 BBOF1Q8ND07 529 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 OR52K1Q8NGK4 314 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SMIM14Q96QK8 99 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TRIB3Q96RU7 358 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TBL1YQ9BQ87 522 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TDRD1Q9BXT4 1180 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 VPS45Q9NRW7 570 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 HAUS2Q9NVX0 235 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC8A2Q9UPR5 921 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SHOC2Q9UQ13 582 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 CHKBQ9Y259 395 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TRIOO75962 3097 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 LOC285095A0A1B0GVY8 99 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TRAFD1O14545 582 aaPredicted RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 PSMD3O43242 534 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 POP4O95707 220 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 ATXN1LP0C7T5 689 aaKnown RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 TNFRSF8P28908 595 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 NTSR1P30989 418 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 RECQLP46063 649 aaPredicted RBP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 ZXDAP98168 799 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 CUL1Q13616 776 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 HLTFQ14527 1009 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC14A2Q15849 920 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 ARSIQ5FYB1 569 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 RALGPS1Q5JS13 557 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 FNBP1LQ5T0N5 605 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 KIAA1211LQ6NV74 962 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 WDR93Q6P2C0 686 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 RANBP10Q6VN20 620 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 ZSWIM9Q86XI8 627 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 AGGF1Q8N302 714 aaeCLIP19.19■□□□□ 0.662e-8■□□□□ 9
CHMP4A-201ENST00000347519 MCUQ8NE86 351 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 RPLP0P6Q8NHW5 317 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 GRIN3AQ8TCU5 1115 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 GABRG3Q99928 467 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 HEPHQ9BQS7 1158 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 LRRC40Q9H9A6 602 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 LMAN1LQ9HAT1 526 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 SARDHQ9UL12 918 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 RAB21Q9UL25 225 aa19.19■□□□□ 0.66
CHMP4A-201ENST00000347519 KANSL1LA0AUZ9 987 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 FZD6O60353 706 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 AVILO75366 819 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 BANF1O75531 89 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 LEFTY1O75610 366 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 UGT2B4P06133 528 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 FAM153BP0C7A2 387 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 METAP1P53582 386 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 CDK18Q07002 472 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 GALNT3Q14435 633 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 UBXN2BQ14CS0 331 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 PTPRRQ15256 657 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 FAM153CQ494X1 144 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 FBXO43Q4G163 708 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 MSS51Q4VC12 460 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC25A41Q8N5S1 370 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 KCNV2Q8TDN2 545 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 RUBCNQ92622 972 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 FEM1CQ96JP0 617 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 SERPINB12Q96P63 405 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 PPP1R2P1Q96PQ5 205 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 CPEB1Q9BZB8 566 aaKnown RBP19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 TBC1D17Q9HA65 648 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 CASS4Q9NQ75 786 aa19.18■□□□□ 0.66
CHMP4A-201ENST00000347519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 A0A1W2PQF6 199 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 FAM170BA6NMN3 283 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 ERI2A8K979 691 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 NPC1O15118 1278 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 HTRA2O43464 458 aaPredicted RBP19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 TPH1P17752 444 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 CDK16Q00536 496 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 BCL2L1Q07817 233 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 CAMK2GQ13555 558 aaPredicted RBP19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 GAS6Q14393 721 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 SIRPB2Q5JXA9 342 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 ZCCHC9Q8N567 271 aaKnown RBP19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 SHDQ96IW2 340 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 SUV39H2Q9H5I1 410 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 ATP13A3Q9H7F0 1226 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 CD248Q9HCU0 757 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 IL36AQ9UHA7 158 aa19.17■□□□□ 0.66
CHMP4A-201ENST00000347519 BDP1A6H8Y1 2624 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 GOLGA6CA6NDK9 693 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 GOLGA6BA6NDN3 693 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 PGLSO95336 258 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 GOLGA6DP0CG33 693 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 MAGEA3P43357 314 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms