RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TREX1Q9NSU2 369 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 ABCB8Q9NUT2 735 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 MARK1Q9P0L2 795 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 WNT6Q9Y6F9 365 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 CHD7Q9P2D1 2997 aa21.67■■□□□ 1.06
TSPAN3-202ENST00000346495 CCDC78A2IDD5 438 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TYROBPO43914 113 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 PAPSS2O95340 614 aaPredicted RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 MPP2Q14168 576 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 HSP90AA5PQ58FG0 334 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 PITRM1Q5JRX3 1037 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TSTD2Q5T7W7 516 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 KIAA0930Q6ICG6 404 aaPredicted RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 ESRP1Q6NXG1 681 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 NCEH1Q6PIU2 408 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TMEM184AQ6ZMB5 413 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TIFABQ6ZNK6 161 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 RNF135Q8IUD6 432 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 ADGRG2Q8IZP9 1017 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 SERAC1Q96JX3 654 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC17A6Q9P2U8 582 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 INTS6Q9UL03 887 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 FCF1Q9Y324 198 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 CHD9Q3L8U1 2897 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TYRP14679 529 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 CA4P22748 312 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 HLA-FP30511 346 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC18A2Q05940 514 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 GALNT3Q14435 633 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 LY6G5CQ5SRR4 150 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 GPR149Q86SP6 731 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TDHQ8IZJ6 230 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 BANPQ8N9N5 519 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 MGARPQ8TDB4 240 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 TDRD1Q9BXT4 1180 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 NSUN3Q9H649 340 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 IARS2Q9NSE4 1012 aaKnown RBP21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 ANKRD36A6QL64 1941 aa21.66■■□□□ 1.06
TSPAN3-202ENST00000346495 ZWINTO95229 277 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 MT-CO1P00395 513 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 BMPR2Q13873 1038 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 SMAD1Q15797 465 aaKnown RBP21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 MROH9Q5TGP6 573 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 SRLQ86TD4 932 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 NPAS3Q8IXF0 933 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 DYDC1Q8WWB3 177 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 NSMCE3Q96MG7 304 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 SLC2A11Q9BYW1 496 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 EPN3Q9H201 632 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 GGA2Q9UJY4 613 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 CHKBQ9Y259 395 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 RAI2Q9Y5P3 530 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 PSAT1Q9Y617 370 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 MYOFQ9NZM1 2061 aa21.65■■□□□ 1.06
TSPAN3-202ENST00000346495 HMX2A2RU54 273 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 MROH6A6NGR9 719 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 GOLGA8RI6L899 631 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 PYGBP11216 843 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 SPRP35270 261 aaPredicted RBP21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 CSE1LP55060 971 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 AP1S1P61966 158 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 DMC1Q14565 340 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 CNGA3Q16281 694 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 SH2D5Q6ZV89 423 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 STRA8Q7Z7C7 330 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 EFHBQ8N7U6 833 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 DENND1AQ8TEH3 1009 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 PEX13Q92968 403 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 AGAP2Q99490 1192 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 KLF6Q99612 283 aaPredicted RBP21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 RBBP8Q99708 897 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 ADGRE3Q9BY15 652 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 CCDC134Q9H6E4 229 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 DUS2Q9NX74 493 aaKnown RBP21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 SLC2A6Q9UGQ3 507 aa21.64■■□□□ 1.05
TSPAN3-202ENST00000346495 K7ERQ8 282 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 RFPL1O75677 317 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 VAPBO95292 243 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 GLP2RO95838 553 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 PABPC1P11940 636 aaKnown RBP21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 RPA3P35244 121 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 ARCN1P48444 511 aaKnown RBP21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 CSNK1DP48730 415 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 HYAL1Q12794 435 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 LRRC14Q15048 493 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 FUT11Q495W5 492 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 CNTN4Q8IWV2 1026 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 GABPB2Q8TAK5 448 aaPredicted RBP21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 BRSK1Q8TDC3 778 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 OSCP1Q8WVF1 389 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 APOPT1Q96IL0 206 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 ASB16Q96NS5 453 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 FAM167BQ9BTA0 163 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 GDE1Q9NZC3 331 aa21.63■■□□□ 1.05
TSPAN3-202ENST00000346495 GMNCA6NCL1 334 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 TM9SF1O15321 606 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 SIN3BO75182 1162 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 ITGA2BP08514 1039 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 CCNFP41002 786 aa21.62■■□□□ 1.05
TSPAN3-202ENST00000346495 MAPK8P45983 427 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms