RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 PRCCQ92733 491 aaPredicted RBP18.96■□□□□ 0.63
CDHR4-201ENST00000343366 PPP1R16AQ96I34 528 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 C16orf45Q96MC5 204 aaPredicted RBP18.96■□□□□ 0.63
CDHR4-201ENST00000343366 PPP1R2P1Q96PQ5 205 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 HHIPQ96QV1 700 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 IL12RB2Q99665 862 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 MGME1Q9BQP7 344 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 HERPUD2Q9BSE4 406 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 TUBB2BQ9BVA1 445 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 RSPH9Q9H1X1 276 aaPredicted RBP18.96■□□□□ 0.63
CDHR4-201ENST00000343366 IL36AQ9UHA7 158 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 PLXND1Q9Y4D7 1925 aa18.96■□□□□ 0.63
CDHR4-201ENST00000343366 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 A0A1W2PQ67 120 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 TCRBV21S2A2A0A5A6 115 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 ZNF217O75362 1048 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 ZNF821O75541 412 aaPredicted RBP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 ACADMP11310 421 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 CEACAM1P13688 526 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 NUMBP49757 651 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 FOXC1Q12948 553 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 MYLK3Q32MK0 819 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 TTC31Q49AM3 519 aaPredicted RBP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 TEX44Q53QW1 395 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 ALG1LQ6GMV1 187 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 RASSF3Q86WH2 238 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 TMPRSS6Q8IU80 811 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 NETO2Q8NC67 525 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 SLC35B2Q8TB61 432 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 HCAR2Q8TDS4 363 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 CD248Q9HCU0 757 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 ZDHHC4Q9NPG8 344 aa18.95■□□□□ 0.62
CDHR4-201ENST00000343366 RBM22Q9NW64 420 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 BCCIPQ9P287 314 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 FEZ2Q9UHY8 353 aaPredicted RBP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 DRG1Q9Y295 367 aaKnown RBP18.95■□□□□ 0.62
CDHR4-201ENST00000343366 CELSR3Q9NYQ7 3312 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 SETXQ7Z333 2677 aaKnown RBP18.94■□□□□ 0.62
CDHR4-201ENST00000343366 DNTTP04053 509 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 C5AR1P21730 350 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 CA4P22748 312 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 CHRNA3P32297 505 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 ACTN2P35609 894 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 CCNHP51946 323 aaPredicted RBP18.94■□□□□ 0.62
CDHR4-201ENST00000343366 COPAP53621 1224 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 SLC14A2Q15849 920 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 PMS2CLQ68D20 193 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 KIAA1211LQ6NV74 962 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 LEKR1Q6ZMV7 388 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 DPY19L3Q6ZPD9 716 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 SIPA1Q96FS4 1042 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 ZNF641Q96N77 438 aaPredicted RBP18.94■□□□□ 0.62
CDHR4-201ENST00000343366 NUDCD1Q96RS6 583 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 SCNM1Q9BWG6 230 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 TM6SF2Q9BZW4 377 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 LHX3Q9UBR4 397 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 ATP8A1Q9Y2Q0 1164 aa18.94■□□□□ 0.62
CDHR4-201ENST00000343366 KCNK1O00180 336 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 LIASO43766 372 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 BNIP3LO60238 219 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 RHOBTB1O94844 696 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 JCHAINP01591 159 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 ITGAVP06756 1048 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 CREB5Q02930 508 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 ELF2Q15723 593 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 ITPRIPL1Q6GPH6 555 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 C4orf22Q6V702 233 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 USP30Q70CQ3 517 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 SRLQ86TD4 932 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 STK40Q8N2I9 435 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 PGBD3Q8N328 593 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 RYBPQ8N488 228 aaPredicted RBP18.93■□□□□ 0.62
CDHR4-201ENST00000343366 ZNF366Q8N895 744 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 TSEN2Q8NCE0 465 aaKnown RBP18.93■□□□□ 0.62
CDHR4-201ENST00000343366 COG1Q8WTW3 980 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 MRGPRX1Q96LB2 322 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 RUNDC3BQ96NL0 473 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 FAM129BQ96TA1 746 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 TNKS2Q9H2K2 1166 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 ATP13A3Q9H7F0 1226 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 NT5MQ9NPB1 228 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 SCUBE2Q9NQ36 999 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 DYRK4Q9NR20 520 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 SEPT10Q9P0V9 454 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 PPM1HQ9ULR3 514 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 NCKAP1Q9Y2A7 1128 aa18.93■□□□□ 0.62
CDHR4-201ENST00000343366 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 ANTXRLA6NF34 631 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 IL1BP01584 269 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 CAPNS1P04632 268 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 GABRG2P18507 467 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 NFKBIAP25963 317 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 PTPN3P26045 913 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 RBL1P28749 1068 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 SERPINA4P29622 427 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 OXTRP30559 389 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 SCNN1BP51168 640 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 SUOXP51687 545 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 ITKQ08881 620 aa18.92■□□□□ 0.62
CDHR4-201ENST00000343366 C11orf74Q86VG3 221 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms