RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 BTRCQ9Y297 605 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 MTF2Q9Y483 593 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 LRP6O75581 1613 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 LYNP07948 512 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 UQCRBP14927 111 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PSEN1P49768 467 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 FOLH1Q04609 750 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 PEX6Q13608 980 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 SH3D19Q5HYK7 790 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 RNF220Q5VTB9 566 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ESRP1Q6NXG1 681 aaKnown RBP7.25□□□□□ -1.25
VCAN-202ENST00000342785 C15orf39Q6ZRI6 1047 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 MPP5Q8N3R9 675 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 ARRDC4Q8NCT1 418 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 SPATA17Q96L03 361 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 BCO2Q9BYV7 579 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 XYLT2Q9H1B5 865 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 IMPAD1Q9NX62 359 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 IGSF9Q9P2J2 1179 aa7.25□□□□□ -1.25
VCAN-202ENST00000342785 DPPA5A6NC42 116 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CPSF4O95639 269 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 LRG1P02750 347 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 URODP06132 367 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ATN1P54259 1190 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 NR1H2P55055 460 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ROR2Q01974 943 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 MTA1Q13330 715 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TARBP2Q15633 366 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 NOL9Q5SY16 702 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 TAC4Q86UU9 113 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TSPAN14Q8NG11 270 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PCED1BQ96HM7 432 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SLC17A6Q9P2U8 582 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TEX264Q9Y6I9 313 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CHD2O14647 1828 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 CCL22O00626 93 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 NRP2O60462 931 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 OR4Q2P0C623 313 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PCYT1AP49585 367 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 HK2P52789 917 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ACTR3P61158 418 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 KCNJ11Q14654 390 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PGS1Q32NB8 556 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TIGD2Q4W5G0 525 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 FSTL5Q8N475 847 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 ATG16L2Q8NAA4 619 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 AGAP2Q99490 1192 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SYT11Q9BT88 431 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TBCDQ9BTW9 1192 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TXNRD2Q9NNW7 524 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TELO2Q9Y4R8 837 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TLR5O60602 858 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 IPO13O94829 963 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 HLA-DPA1P20036 260 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 S100A5P33763 92 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CCT8P50990 548 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 XIAPP98170 497 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 MPP1Q00013 466 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 C16orf72Q14CZ0 275 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TRIM16LQ309B1 348 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ARMC12Q5T9G4 340 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 MAML3Q96JK9 1138 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SIGLEC10Q96LC7 697 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CDK5RAP1Q96SZ6 601 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 TNPO3Q9Y5L0 923 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 MAN1A2O60476 641 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 FGF1P05230 155 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ETS2P15036 469 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ABL2P42684 1182 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 ARHGAP1Q07960 439 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 PSMD5Q16401 504 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 LSM12Q3MHD2 195 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 ITFG1Q8TB96 612 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 MAGEE2Q8TD90 523 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 SLC35F5Q8WV83 523 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CASP10Q92851 521 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 GBA3Q9H227 469 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 RNF39Q9H2S5 420 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 OPTCQ9UBM4 332 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SNX10Q9Y5X0 201 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TYROBPO43914 113 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 LGR5O75473 907 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 SOAT1P35610 550 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 RABGGTBP53611 331 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 GRIK3Q13003 919 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 BOP1Q14137 746 aaKnown RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 HIST2H2ACQ16777 129 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 SLC44A4Q53GD3 710 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 CDCA2Q69YH5 1023 aaPredicted RBP7.24□□□□□ -1.25
VCAN-202ENST00000342785 HIST2H2AA3Q6FI13 130 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 KIAA0408Q6ZU52 694 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 GPR152Q8TDT2 470 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 LZICQ8WZA0 190 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TBATAQ96M53 351 aa7.24□□□□□ -1.25
VCAN-202ENST00000342785 TM6SF2Q9BZW4 377 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms