RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TLE3Q04726 772 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 DEFB133Q30KQ1 61 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 PRRT3Q5FWE3 981 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 FAM72AQ5TYM5 149 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 FAM72DQ6L9T8 149 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 ESRP1Q6NXG1 681 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 FAM72BQ86X60 149 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 NAT6Q93015 286 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 CCDC97Q96F63 343 aaPredicted RBP13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 TBATAQ96M53 351 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 EPAS1Q99814 870 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 NCAPGQ9BPX3 1015 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 DPH1Q9BZG8 443 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 DKK3Q9UBP4 350 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 APOBEC3BQ9UH17 382 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 MFHAS1Q9Y4C4 1052 aa13.23□□□□□ -0.29
NECTIN1-203ENST00000341398 LY6G6EA0A0G2JKS1 128 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 AREL1O15033 823 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 MMP20O60882 483 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 TCEA3O75764 348 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 TMCC1O94876 653 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 PEX5P50542 639 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 HDAC4P56524 1084 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 JAM2P57087 298 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 TMPRSS3P57727 454 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 PPARDQ03181 441 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 KRT31Q15323 416 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 PARP15Q460N3 678 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 RAB6CQ53S08 254 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 ATXN7L2Q5T6C5 722 aaPredicted RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 RBM44Q6ZP01 1051 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 PHF13Q86YI8 300 aaPredicted RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 CCDC185Q8N715 623 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 RTL3Q8N8U3 475 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 HCAR2Q8TDS4 363 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 KCNE4Q8WWG9 221 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 NAF1Q96HR8 494 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 CPEB1Q9BZB8 566 aaKnown RBP13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 RAB6CQ9H0N0 254 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 KLF15Q9UIH9 416 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 U3KQA8 63 aa13.22□□□□□ -0.29
NECTIN1-203ENST00000341398 LMO7DNF2Z398 122 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 SPINT1O43278 529 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 CREB3O43889 395 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 LZTS3O60299 673 aaPredicted RBP13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 CTSEP14091 401 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 TGM2P21980 687 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 HTR1BP28222 390 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 EIF4A3P38919 411 aaKnown RBP13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 RHDQ02161 417 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 ELOCQ15369 112 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 CFAP58Q5T655 872 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 IGF2-ASQ6U949 168 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 MACC1Q6ZN28 852 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 FSTL5Q8N475 847 aaPredicted RBP13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 HIC2Q96JB3 615 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 BOCQ9BWV1 1114 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 GGT7Q9UJ14 662 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 ITM2BQ9Y287 266 aa13.21□□□□□ -0.29
NECTIN1-203ENST00000341398 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.3
NECTIN1-203ENST00000341398 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 RASA4BC9J798 803 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 MUSKO15146 869 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 KLK10O43240 276 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 RASA4O43374 803 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 GJB6O95452 261 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 ALPIP09923 528 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 TIMP2P16035 220 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 HTR7P34969 479 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 KLK7P49862 253 aa13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
NECTIN1-203ENST00000341398 PTP4A2Q12974 167 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms