RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CD86P42081 329 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 NUMBP49757 651 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 COPAP53621 1224 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 ARPP19P56211 112 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 TAS2R39P59534 338 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 CTXN3Q4LDR2 81 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 ARL13AQ5H913 290 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 CFAP157Q5JU67 520 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 TSTD2Q5T7W7 516 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 KIAA0930Q6ICG6 404 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 CIR1Q86X95 450 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 LRRC49Q8IUZ0 686 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GALNT15Q8N3T1 639 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 RDH11Q8TC12 318 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 PSMG2Q969U7 264 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 PPP1R36Q96LQ0 422 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GPR62Q9BZJ7 368 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 CRISPLD1Q9H336 500 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 ATP13A1Q9HD20 1204 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 IL37Q9NZH6 218 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 XPR1Q9UBH6 696 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 HCSTQ9UBK5 93 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 PLXNA3P51805 1871 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GOLGA8QA0A0J9YX86 632 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 LOC100653049A0A140TA62 436 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GOLGA8OA6NCC3 632 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GOLGA8NF8WBI6 632 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 H2AFYO75367 372 aaKnown RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 ZMPSTE24O75844 475 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 CABYRO75952 493 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 KRT34O76011 436 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 GATMP50440 423 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 NDST2P52849 883 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 DSC2Q02487 901 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 MSLNQ13421 630 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 HNRNPDQ14103 355 aaKnown RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 FAM171A1Q5VUB5 890 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 CNSTQ6PJW8 725 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 PABPC5Q96DU9 382 aaKnown RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 MYEOVQ96EZ4 313 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 ELMO2Q96JJ3 720 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 TUBGCP5Q96RT8 1024 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 OMDQ99983 421 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 ILKAPQ9H0C8 392 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 WDR55Q9H6Y2 383 aaPredicted RBP20.3■□□□□ 0.84
SPG7-202ENST00000341316 TMEM248Q9NWD8 314 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 FBXO5Q9UKT4 447 aa20.3■□□□□ 0.84
SPG7-202ENST00000341316 VWA8A3KMH1 1905 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 MATN2O00339 956 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 SORBS2O94875 1100 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 HMBSP08397 361 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 SLC2A3P11169 496 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 STMN1P16949 149 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 EPHB1P54762 984 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 ROR2Q01974 943 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 ITKQ08881 620 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 RBM20Q5T481 1227 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 MAP3K21Q5TCX8 1036 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 RASIP1Q5U651 963 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 RAP1GAP2Q684P5 730 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 NEPROQ6NW34 567 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 FBXL22Q6P050 247 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 AAGABQ6PD74 315 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 LSMEM2Q8N112 164 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 SREK1Q8WXA9 508 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 GBP5Q96PP8 586 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 PPP1R2P1Q96PQ5 205 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 FAM193BQ96PV7 902 aaPredicted RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 UBE2OQ9C0C9 1292 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 ARNT2Q9HBZ2 717 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 ZDHHC2Q9UIJ5 367 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 IGLV3-10A0A075B6K4 115 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 GJB3O75712 270 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 PDE5AO76074 875 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 PIGNO95427 931 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 RENBPP51606 427 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 MRPL58Q14197 206 aaKnown RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 RSPO2Q6UXX9 243 aaPredicted RBP20.29■□□□□ 0.84
SPG7-202ENST00000341316 FRMD7Q6ZUT3 714 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 MFN1Q8IWA4 741 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 FBXO32Q969P5 355 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 TSNARE1Q96NA8 513 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 NDNQ99608 321 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPG7-202ENST00000341316 FNIP2Q9P278 1114 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 MID2Q9UJV3 735 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 RAP2CQ9Y3L5 183 aa20.29■□□□□ 0.84
SPG7-202ENST00000341316 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 GRID2O43424 1007 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 CCNT2O60583 730 aaKnown RBP20.28■□□□□ 0.84
SPG7-202ENST00000341316 VNN2O95498 520 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 COL6A2P12110 1019 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 GLDCP23378 1020 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 YWHAQP27348 245 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 CD151P48509 253 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 POLE2P56282 527 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 TAF10Q12962 218 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 MARC1Q5VT66 337 aa20.28■□□□□ 0.84
SPG7-202ENST00000341316 RNF111Q6ZNA4 994 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms