RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TERF1P54274 439 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 BCL2L1Q07817 233 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 NIPAL4Q0D2K0 466 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ELF2Q15723 593 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PIP5KL1Q5T9C9 394 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 LAYNQ6UX15 382 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 SLC13A5Q86YT5 568 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PIGKQ92643 395 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PPP1R16AQ96I34 528 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 CAPZA3Q96KX2 299 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 WRAP53Q9BUR4 548 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TNRC6BQ9UPQ9 1833 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ADRB3P13945 408 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 PTPN7P35236 360 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TRAF2Q12933 501 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 BYSLQ13895 437 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 HNRNPDQ14103 355 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 IHHQ14623 411 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 LONRF2Q1L5Z9 754 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ZNF805Q5CZA5 627 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 SYCP2LQ5T4T6 812 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ASCL5Q7RTU5 278 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TTC7BQ86TV6 843 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 CNTD1Q8N815 330 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 SPATA22Q8NHS9 363 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 COG1Q8WTW3 980 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 MAML1Q92585 1016 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TSGA13Q96PP4 275 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 POLR1EQ9GZS1 481 aaKnown RBP13.35□□□□□ -0.27
TUBD1-202ENST00000340993 BRD8Q9H0E9 1235 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 EPC1Q9H2F5 836 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ARRDC1-AS1Q9H2J1 176 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 SUV39H2Q9H5I1 410 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 ATP13A3Q9H7F0 1226 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 FZD3Q9NPG1 666 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 DNPEPQ9ULA0 475 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 DMXL1Q9Y485 3027 aa13.35□□□□□ -0.27
TUBD1-202ENST00000340993 MT-CYBP00156 380 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-202ENST00000340993 PRLRP16471 622 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 CTPS1P17812 591 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 ITGB7P26010 798 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 SERPINA4P29622 427 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 OXTRP30559 389 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 NBL1P41271 181 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 NEK3P51956 506 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 TAS2R38P59533 333 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 ZBTB16Q05516 673 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 WASHC5Q12768 1159 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 KLF1Q13351 362 aaPredicted RBP13.34□□□□□ -0.27
TUBD1-202ENST00000340993 SLC45A4Q5BKX6 768 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 SEL1L3Q68CR1 1132 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 PMS2CLQ68D20 193 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
TUBD1-202ENST00000340993 LRRC49Q8IUZ0 686 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 NUDCD1Q96RS6 583 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 KCNH6Q9H252 994 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 NCDNQ9UBB6 729 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 EIF2B4Q9UI10 523 aaKnown RBP13.34□□□□□ -0.27
TUBD1-202ENST00000340993 CHKBQ9Y259 395 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 COQ6Q9Y2Z9 468 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 PCDHB9Q9Y5E1 797 aa13.34□□□□□ -0.27
TUBD1-202ENST00000340993 PMPCBO75439 489 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
TUBD1-202ENST00000340993 SLC4A1P02730 911 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 NFKB1P19838 968 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 GDF10P55107 478 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 FAM193AP78312 1265 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 FAXCQ5TGI0 409 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 KDM7AQ6ZMT4 941 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 USP30Q70CQ3 517 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 PID1Q7Z2X4 250 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
TUBD1-202ENST00000340993 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms