RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PSMC3IPQ9P2W1 217 aaPredicted RBP17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CCDC78A2IDD5 438 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 CD160O95971 181 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 KRT15P19012 456 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 POLR2EP19388 210 aaKnown RBP17.52■□□□□ 0.4
CLDN4-201ENST00000340958 MTHFRP42898 656 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 NSUN2Q08J23 767 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLDN4-201ENST00000340958 DMC1Q14565 340 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 PDGFRLQ15198 375 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 ALG1LQ6GMV1 187 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 TANGO2Q6ICL3 276 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 AHI1Q8N157 1196 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLDN4-201ENST00000340958 SUSD6Q92537 303 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 FEM1CQ96JP0 617 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 TRPV4Q9HBA0 871 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 INTS6Q9UL03 887 aaKnown RBP17.52■□□□□ 0.4
CLDN4-201ENST00000340958 SOX13Q9UN79 622 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 CUL9Q8IWT3 2517 aa17.52■□□□□ 0.4
CLDN4-201ENST00000340958 BDP1A6H8Y1 2624 aa17.52■□□□□ 0.39
CLDN4-201ENST00000340958 FAM237BA0A1B0GVD1 139 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ARSAP15289 507 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 HLA-DPA1P20036 260 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 CTSOP43234 321 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 DGKGP49619 791 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 GALNT3Q14435 633 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 SIRPB2Q5JXA9 342 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ATXN7L2Q5T6C5 722 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 STEAP4Q687X5 459 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 DENND5AQ6IQ26 1287 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 TAOK1Q7L7X3 1001 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 LRRC6Q86X45 466 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 RMDN1Q96DB5 314 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 LHX3Q9UBR4 397 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 FETUBQ9UGM5 382 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 CHD5Q8TDI0 1954 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 DENND4AQ7Z401 1863 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 BNIP3LO60238 219 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 USP1O94782 785 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 EPOP01588 193 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ADRA1DP25100 572 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 NNMTP40261 264 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ECT2LQ008S8 904 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 NR1H3Q13133 447 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 SMAD1Q15797 465 aaKnown RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ANKRD20A4Q4UJ75 823 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 MBLAC2Q68D91 279 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ASTLQ6HA08 431 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 PKN3Q6P5Z2 889 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 TRMT10BQ6PF06 316 aaKnown RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 RASSF3Q86WH2 238 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 TADA1Q96BN2 335 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ASIC4Q96FT7 647 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 LMLNQ96KR4 655 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 MYADMQ96S97 322 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ADGRE3Q9BY15 652 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 CIPCQ9C0C6 399 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 TXNDC16Q9P2K2 825 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 CHKBQ9Y259 395 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 PCDHGC4Q9Y5F7 938 aa17.51■□□□□ 0.39
CLDN4-201ENST00000340958 NUP210Q8TEM1 1887 aaPredicted RBP17.51■□□□□ 0.39
CLDN4-201ENST00000340958 LOC285095A0A1B0GVY8 99 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 SMAD6O43541 496 aaKnown RBP17.5■□□□□ 0.39
CLDN4-201ENST00000340958 IGSF6O95976 241 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 FGF1P05230 155 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 PAMP19021 973 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 CR2P20023 1033 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 NR1D1P20393 614 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 PRKCHP24723 683 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 STK19P49842 368 aaPredicted RBP17.5■□□□□ 0.39
CLDN4-201ENST00000340958 GYS2P54840 703 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 GRM2Q14416 872 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 SLC14A2Q15849 920 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 SRLQ86TD4 932 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 TDRPQ86YL5 185 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 OR6K2Q8NGY2 324 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 TTC17Q96AE7 1141 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 MFSD3Q96ES6 412 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 TNKS2Q9H2K2 1166 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 ARNT2Q9HBZ2 717 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 C20orf96Q9NUD7 363 aaPredicted RBP17.5■□□□□ 0.39
CLDN4-201ENST00000340958 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
CLDN4-201ENST00000340958 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 HOXC11O43248 304 aaPredicted RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 NDST3O95803 873 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 LAMP2P13473 410 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 FCARP24071 287 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 MAPK8P45983 427 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 AP1S1P61966 158 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 IHHQ14623 411 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 RALGPS1Q5JS13 557 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 LGSNQ5TDP6 509 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 NCEH1Q6PIU2 408 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms