RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SARM1Q6SZW1 724 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 KYAT3Q6YP21 454 aaKnown RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 RAB44Q7Z6P3 723 aaPredicted RBP13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 LRRC49Q8IUZ0 686 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ARHGAP12Q8IWW6 846 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 SAP25Q8TEE9 199 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 ADAMTS14Q8WXS8 1223 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 HSPH1Q92598 858 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 C1QTNF7Q9BXJ2 289 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 C1QTNF2Q9BXJ5 285 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 CTTNBP2NLQ9P2B4 639 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 KNL1Q8NG31 2342 aa13.5□□□□□ -0.25
SIRPB3P-201ENST00000340424 CABIN1Q9Y6J0 2220 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 SPEGQ15772 3267 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 ASPMQ8IZT6 3477 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 FAM221BA6H8Z2 402 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 J3KR12 359 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 DFFAO00273 331 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 KCNK3O14649 394 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 TOR1BO14657 336 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 MFAP3LO75121 409 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 TMEM253P0C7T8 217 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CDK4P11802 303 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 PRLRP16471 622 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 SERPINA4P29622 427 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 GKP32189 559 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 MAN1A1P33908 653 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 HSPA9P38646 679 aaKnown RBP13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 KRT81Q14533 505 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CFAP58Q5T655 872 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 TTC7BQ86TV6 843 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 GAS2L3Q86XJ1 694 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 BBS5Q8N3I7 341 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 NPWQ8N729 165 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 FAM71BQ8TC56 605 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 VOPP1Q96AW1 172 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CCDC42Q96M95 316 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CINPQ9BW66 212 aaPredicted RBP13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 SCNM1Q9BWG6 230 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 ATP13A3Q9H7F0 1226 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 RRAGDQ9NQL2 400 aaPredicted RBP13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 KLHL11Q9NVR0 708 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 SEPT3Q9UH03 358 aa13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 IPO11Q9UI26 975 aaKnown RBP13.49□□□□□ -0.25
SIRPB3P-201ENST00000340424 CHD8Q9HCK8 2581 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 TRPM6Q9BX84 2022 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 FPGTO14772 594 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 PROSCO94903 275 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 DKK1O94907 266 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 KRT7P08729 469 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 XPAP23025 273 aaPredicted RBP13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 ABL2P42684 1182 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 RABIFP47224 123 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 AP1S1P61966 158 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 IL9RQ01113 521 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 SHBQ15464 509 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 ERAP2Q6P179 960 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 GCNT7Q6ZNI0 430 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 CXorf40AQ8TE69 158 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 NSMCE1Q8WV22 266 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 TSC1Q92574 1164 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 BTBD6Q96KE9 485 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 EXOC2Q96KP1 924 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 PSKH2Q96QS6 385 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 SUV39H2Q9H5I1 410 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 GPR27Q9NS67 375 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
SIRPB3P-201ENST00000340424 TPRP12270 2363 aaKnown RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 A0A1W2PQ67 120 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 PAK4O96013 591 aaPredicted RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 C1SP09871 688 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 TCF4P15884 667 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 CDH6P55285 790 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 CCDC173Q0VFZ6 552 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 PDK2Q15119 407 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 UGP2Q16851 508 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 TMEM52BQ4KMG9 183 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 RALGPS1Q5JS13 557 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 PTAR1Q7Z6K3 402 aaPredicted RBP13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 SRLQ86TD4 932 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 RHOT2Q8IXI1 618 aa13.47□□□□□ -0.25
SIRPB3P-201ENST00000340424 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms