RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 GPSM1Q86YR5 675 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SLC22A9Q8IVM8 553 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 VMP1Q96GC9 406 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 CDH7Q9ULB5 785 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CDH3P22223 829 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 GP5P40197 560 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 STXBP5Q5T5C0 1151 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SLC44A2Q8IWA5 706 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 CLEC4CQ8WTT0 213 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CPNE1Q99829 537 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 TJP1Q07157 1748 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 INSIG1O15503 277 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 MPOP05164 745 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ITGAVP06756 1048 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SPATS2Q86XZ4 545 aaKnown RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 FAM9CQ8IZT9 166 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CCDC185Q8N715 623 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CASKIN2Q8WXE0 1202 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 NELL2Q99435 816 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ETNK1Q9HBU6 452 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 PIRO00625 290 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 EPHB6O15197 1021 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ADRA1DP25100 572 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 RAB33AQ14088 237 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SLC26A11Q86WA9 606 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ZNF516Q92618 1163 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 UBE2E3Q969T4 207 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 Q9H521 79 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 DMAC2Q9NW81 257 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 OPTCQ9UBM4 332 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 RPS6KB2Q9UBS0 482 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 KLQ9UEF7 1012 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 F8W810 466 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 ITGAXP20702 1163 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 PON2Q15165 354 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CHI3L2Q15782 390 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 CHST15Q7LFX5 561 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 ROPN1BQ9BZX4 212 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 ROPN1Q9HAT0 212 aaPredicted RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 PCDHGC4Q9Y5F7 938 aa12.92□□□□□ -0.34
LIN54-201ENST00000340417 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
LIN54-201ENST00000340417 PJA2O43164 708 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 CCDC22O60826 627 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 TNFP01375 233 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 CAPZA2P47755 286 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PTPRNQ16849 979 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 FNBP1LQ5T0N5 605 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 CDH19Q9H159 772 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 TRPC5OSA6NMA1 111 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 NBNO60934 754 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 GNPDA1P46926 289 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 LRRC8EQ6NSJ5 796 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PHF21BQ96EK2 531 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 SUSD2Q9UGT4 822 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 ZSCAN9O15535 394 aaPredicted RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 SKAP2O75563 359 aaPredicted RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 CYP7B1O75881 506 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 CDK16Q00536 496 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 IL10RBQ08334 325 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 RUNX3Q13761 415 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 LRRC73Q5JTD7 316 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 CLYBLQ8N0X4 340 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 OR4L1Q8NH43 312 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 MYLIPQ8WY64 445 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 NDEL1Q9GZM8 345 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 NDE1Q9NXR1 346 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 SH3BGRLO75368 114 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 HAUS5O94927 633 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 VIPR2P41587 438 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 XKR4Q5GH76 650 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 GDPD4Q6W3E5 623 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 HIPK4Q8NE63 616 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PSMG2Q969U7 264 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 TMEM209Q96SK2 561 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 OSBPL2Q9H1P3 480 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 NEUROG2Q9H2A3 272 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 FBXO6Q9NRD1 293 aaPredicted RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 STX18Q9P2W9 335 aaKnown RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 B4DGG1 531 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 ADH1BP00325 375 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 SF1Q15637 639 aaKnown RBP12.91□□□□□ -0.34
LIN54-201ENST00000340417 PDCD2Q16342 344 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms