RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 SYBUQ9NX95 663 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 LIMD1Q9UGP4 676 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 ARIH1Q9Y4X5 557 aaPredicted RBP7.91□□□□□ -1.14
TMC1-202ENST00000340019 BPTFQ12830 3046 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 AGPSO00116 658 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 FZD6O60353 706 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 IGSF6O95976 241 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 SSTR1P30872 391 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 MAPK8P45983 427 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 SNRPD1P62314 119 aaKnown RBP7.91□□□□□ -1.14
TMC1-202ENST00000340019 CRADDP78560 199 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 KDSRQ06136 332 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 SIRPB2Q5JXA9 342 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 CERCAMQ5T4B2 595 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 DENND2CQ68D51 928 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 KDELC2Q7Z4H8 507 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 KDM1BQ8NB78 822 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 ZIM3Q96PE6 472 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 FBRSL1Q9HCM7 1045 aaKnown RBP7.91□□□□□ -1.14
TMC1-202ENST00000340019 HCN2Q9UL51 889 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 PLAAQ9Y263 795 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 RAI2Q9Y5P3 530 aa7.91□□□□□ -1.14
TMC1-202ENST00000340019 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.91□□□□□ -1.14
TMC1-202ENST00000340019 TRAFD1O14545 582 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 KAT7O95251 611 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 SHBGP04278 402 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 TPH1P17752 444 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 HLA-DPA1P20036 260 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 GRIA2P42262 883 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 SOX9P48436 509 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 TRAF2Q12933 501 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PREPLQ4J6C6 727 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 CARD16Q5EG05 197 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CFAP58Q5T655 872 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 STEAP4Q687X5 459 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 OR2A12Q8NGT7 310 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CSGALNACT1Q8TDX6 532 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 BFARQ9NZS9 450 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 EVLQ9UI08 416 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 STARD13Q9Y3M8 1113 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PCDHGC4Q9Y5F7 938 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 TCF20Q9UGU0 1960 aaKnown RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 TTC34A8MYJ7 566 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 WASH3PC4AMC7 463 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 HTRA2O43464 458 aaPredicted RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 NDST3O95803 873 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CPP00450 1065 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 C1QAP02745 245 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 MYLK3Q32MK0 819 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PUS10Q3MIT2 529 aaKnown RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 ARMC3Q5W041 872 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 UNC5AQ6ZN44 842 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 DPY19L3Q6ZPD9 716 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 C3orf62Q6ZUJ4 267 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 Q6ZVU0 165 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 TMEM135Q86UB9 458 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CCNJLQ8IV13 435 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PALM2Q8IXS6 379 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 SLC25A41Q8N5S1 370 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 OR6K2Q8NGY2 324 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 DNASE1L2Q92874 299 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 PTPRN2Q92932 1015 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 STAMBPL1Q96FJ0 436 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 NAT9Q9BTE0 207 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 KIFC1Q9BW19 673 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CPEB1Q9BZB8 566 aaKnown RBP7.9□□□□□ -1.14
TMC1-202ENST00000340019 TMEM245Q9H330 911 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 CHKBQ9Y259 395 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 MAD1L1Q9Y6D9 718 aa7.9□□□□□ -1.14
TMC1-202ENST00000340019 MAGEB16A2A368 324 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 TBC1D3BA6NDS4 549 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 SOCS5O75159 536 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 SPAG6O75602 509 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 FGF1P05230 155 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 PDHA1P08559 390 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 GSTA2P09210 222 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 IL9P15248 144 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 PGAM1P18669 254 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 GKP32189 559 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 CTHP32929 405 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 NNMTP40261 264 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 GALK1P51570 392 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 CCNHP51946 323 aaPredicted RBP7.89□□□□□ -1.15
TMC1-202ENST00000340019 TFF2Q03403 129 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 ZNF844Q08AG5 666 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 GALNT3Q14435 633 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 ACCSLQ4AC99 568 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 CAMK1DQ8IU85 385 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
TMC1-202ENST00000340019 OR2W6PQ8NHA6 318 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 TUBGCP5Q96RT8 1024 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 RANBP9Q96S59 729 aa7.89□□□□□ -1.15
TMC1-202ENST00000340019 MRM3Q9HC36 420 aaKnown RBP7.89□□□□□ -1.15
TMC1-202ENST00000340019 PRKAG3Q9UGI9 489 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms