RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FUBP1Q96AE4 644 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 LRIG1Q96JA1 1093 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 GDAP1L1Q96MZ0 367 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 LENG8Q96PV6 779 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 EPAS1Q99814 870 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 FUCA2Q9BTY2 467 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 SNRNP25Q9BV90 132 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 CATSPERBQ9H7T0 1116 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 PDFQ9HBH1 243 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 GPR27Q9NS67 375 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 PARVAQ9NVD7 372 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 ACACAQ13085 2346 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.24
NUDCD3-201ENST00000338427 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 EEF2KO00418 725 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 GCATO75600 419 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 IGSF6O95976 241 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 MT-CO3P00414 261 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 CSF2P04141 144 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 CCDC172P0C7W6 258 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 JUNDP17535 347 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 ERCC2P18074 760 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 IGFALSP35858 605 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 ZNF165P49910 485 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 GEMIN4P57678 1058 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 DEFB133Q30KQ1 61 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 ERMARDQ5T6L9 678 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 PDZD3Q86UT5 571 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 ARHGAP12Q8IWW6 846 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 TSEN2Q8NCE0 465 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 LMX1AQ8TE12 382 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 RAB7BQ96AH8 199 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 DKK4Q9UBT3 224 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 PCDHB1Q9Y5F3 818 aa13.52□□□□□ -0.25
NUDCD3-201ENST00000338427 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CXorf51AA0A1B0GTR3 108 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CPED1A4D0V7 1026 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 ZSCAN5CA6NGD5 496 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 A8MX80 341 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 MUSKO15146 869 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 DAPK3O43293 454 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 PRAMEF11O60813 436 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 TM7SF2O76062 418 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CELA2BP08218 269 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 AMPD1P23109 780 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 IL1R2P27930 398 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 RABIFP47224 123 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 ADKP55263 362 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 RAD51Q06609 339 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CDKN3Q16667 212 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 TMEM52BQ4KMG9 183 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 KCTD16Q68DU8 428 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 SRLQ86TD4 932 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 DCP2Q8IU60 420 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 NPWQ8N729 165 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 ZNF548Q8NEK5 533 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 OSBPL1AQ9BXW6 950 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CBX8Q9HC52 389 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 PCDH12Q9NPG4 1184 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 ETNK2Q9NVF9 386 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CWC15Q9P013 229 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 CLCA2Q9UQC9 943 aa13.51□□□□□ -0.25
NUDCD3-201ENST00000338427 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 DFFAO00273 331 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 OPA1O60313 960 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 SERPINC1P01008 464 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 CKMT1AP12532 417 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 NME1P15531 152 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 HNF1BP35680 557 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 PRKCIP41743 596 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 HNRNPKP61978 463 aaKnown RBP eCLIP13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 ILKQ13418 452 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 WSCD2Q2TBF2 565 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 PARP15Q460N3 678 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 CXorf40AQ8TE69 158 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 CASKIN2Q8WXE0 1202 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms