RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 PKNOX1P55347 436 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 CSHL1Q14406 222 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 ZNF423Q2M1K9 1284 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 PIGGQ5H8A4 983 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 SPDYE1Q8NFV5 336 aaPredicted RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 NMUR1Q9HB89 426 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 GTSE1Q9NYZ3 720 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 IPO11Q9UI26 975 aaKnown RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 VPS28Q9UK41 221 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 ZNF623O75123 536 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 VCLP18206 1134 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 XRCC1P18887 633 aaPredicted RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 ATP5F1P24539 256 aaPredicted RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 TUSC3Q13454 348 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 FLOT2Q14254 428 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 SPNS2Q8IVW8 549 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 PGAM4Q8N0Y7 254 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 PQLC1Q8N2U9 271 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 TRPV1Q8NER1 839 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 USP13Q92995 863 aaPredicted RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 FAM192AQ9GZU8 254 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 WDR41Q9HAD4 459 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 IGSF5Q9NSI5 407 aa23.6■■□□□ 1.37
NDEL1-201ENST00000334527 SPATS2LQ9NUQ6 558 aaKnown RBP23.6■■□□□ 1.37
NDEL1-201ENST00000334527 TRPC5OSA6NMA1 111 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 PEX1O43933 1283 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 HNRNPLP14866 589 aaKnown RBP eCLIP23.59■■□□□ 1.37
NDEL1-201ENST00000334527 MSX2P35548 267 aaPredicted RBP23.59■■□□□ 1.37
NDEL1-201ENST00000334527 THPOP40225 353 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 ALDH1A3P47895 512 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 ART3Q13508 389 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 MMEL1Q495T6 779 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 ZNF789Q5FWF6 425 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 OGFRL1Q5TC84 451 aaPredicted RBP23.59■■□□□ 1.37
NDEL1-201ENST00000334527 RNF135Q8IUD6 432 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 SUDS3Q9H7L9 328 aaPredicted RBP23.59■■□□□ 1.37
NDEL1-201ENST00000334527 C6orf203Q9P0P8 240 aaPredicted RBP23.59■■□□□ 1.37
NDEL1-201ENST00000334527 SCN10AQ9Y5Y9 1956 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 A0A1W2PQH9 124 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 KCNU1A8MYU2 1149 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 RAB27AP51159 221 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 DNAJB13P59910 316 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 THEMIS2Q5TEJ8 643 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 ICA1LQ8NDH6 482 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 EFCAB1Q9HAE3 211 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 FIS1Q9Y3D6 152 aa23.59■■□□□ 1.37
NDEL1-201ENST00000334527 SDHDO14521 159 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 TADA2AO75478 443 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 IGHA2P01877 340 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 MRPS22P82650 360 aaKnown RBP23.58■■□□□ 1.37
NDEL1-201ENST00000334527 CEACAM7Q14002 265 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 KDELC1Q6UW63 502 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 RNF148Q8N7C7 305 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 MAELQ96JY0 434 aaKnown RBP23.58■■□□□ 1.37
NDEL1-201ENST00000334527 OLFM1Q99784 485 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 CYP4F12Q9HCS2 524 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 PAPOLBQ9NRJ5 636 aaKnown RBP23.58■■□□□ 1.37
NDEL1-201ENST00000334527 DTNAQ9Y4J8 743 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 HEATR9A2RTY3 570 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 OR4Q2P0C623 313 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 DPP6P42658 865 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 FAM83EQ2M2I3 478 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 SLC30A9Q6PML9 568 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 KIAA0408Q6ZU52 694 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 LRRC49Q8IUZ0 686 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 SCN4BQ8IWT1 228 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 SLC25A51Q9H1U9 297 aa23.58■■□□□ 1.37
NDEL1-201ENST00000334527 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.58■■□□□ 1.37
NDEL1-201ENST00000334527 MYO16Q9Y6X6 1858 aa23.58■■□□□ 1.36
NDEL1-201ENST00000334527 A0A0U1RQF3 1178 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 STX16-NPEPL1H3BU86 382 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 TXNDC9O14530 226 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 TECRLQ5HYJ1 363 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 ST13P4Q8IZP2 240 aaPredicted RBP23.57■■□□□ 1.36
NDEL1-201ENST00000334527 SUSD3Q96L08 255 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 NPAS2Q99743 824 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 NOL6Q9H6R4 1146 aaKnown RBP23.57■■□□□ 1.36
NDEL1-201ENST00000334527 NT5MQ9NPB1 228 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 OSER1Q9NX31 292 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 CAPN8A6NHC0 703 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 SNUPNO95149 360 aaKnown RBP23.57■■□□□ 1.36
NDEL1-201ENST00000334527 MLLT6P55198 1093 aaPredicted RBP23.57■■□□□ 1.36
NDEL1-201ENST00000334527 ITKQ08881 620 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 PIK3R6Q5UE93 754 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 TFAP2DQ7Z6R9 452 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 CEP70Q8NHQ1 597 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 SOCS4Q8WXH5 440 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 SERPINB11Q96P15 392 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 ADAM2Q99965 735 aa23.57■■□□□ 1.36
NDEL1-201ENST00000334527 TTC3P53804 2025 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 TCAF2A6NFQ2 919 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
NDEL1-201ENST00000334527 KCNA5P22460 613 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 MAXP61244 160 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 MS4A2Q01362 244 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 YWHAHQ04917 246 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-201ENST00000334527 SULT2A1Q06520 285 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 BHLHE22Q8NFJ8 381 aaPredicted RBP23.56■■□□□ 1.36
NDEL1-201ENST00000334527 CALML6Q8TD86 181 aa23.56■■□□□ 1.36
NDEL1-201ENST00000334527 TMA16Q96EY4 203 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms