RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CHRNB2P17787 502 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 CALB2P22676 271 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 DIS3LQ8TF46 1054 aaKnown RBP15.13■□□□□ 0.01
C9orf47-201ENST00000334490 RHOBTB2Q9BYZ6 727 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 MAGEH1Q9H213 219 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 TNKS2Q9H2K2 1166 aa15.13■□□□□ 0.01
C9orf47-201ENST00000334490 RGS14O43566 566 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 MAGEC1O60732 1142 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 BMP10O95393 424 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 SHBGP04278 402 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CD48P09326 243 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 COL6A1P12109 1028 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 TSHRP16473 764 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ALDH6A1Q02252 535 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 OCA2Q04671 838 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 IRAK1BP1Q5VVH5 260 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 OR4K2Q8NGD2 314 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 OR52K2Q8NGK3 314 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 B4GALNT2Q8NHY0 566 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CLEC4CQ8WTT0 213 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 KCTD4Q8WVF5 259 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 INPP5DQ92835 1189 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 SPACA7Q96KW9 195 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ASF1AQ9Y294 204 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ASB3Q9Y575 518 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 PHRF1Q9P1Y6 1649 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 A0A088AWK7 358 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 C5orf60A6NFR6 353 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 IFNA14P01570 189 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 EIF2S1P05198 315 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ITGA2BP08514 1039 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF10P21506 573 aaPredicted RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 GPD2P43304 727 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CAPZA2P47755 286 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 RAB10P61026 200 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 PLOD1Q02809 727 aaPredicted RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 FBXW10Q5XX13 1052 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 TAPT1Q6NXT6 567 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 RHBDF2Q6PJF5 856 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CLEC20AQ6ZU45 233 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ACSS3Q9H6R3 686 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 NDRG2Q9UN36 371 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 C16orf96A6NNT2 1141 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 DDX3YO15523 660 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 NDST3O95803 873 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ATP5F1P24539 256 aaPredicted RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 RPA3P35244 121 aaPredicted RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ZNF398Q8TD17 642 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 RHBGQ9H310 441 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CAAP1Q9H8G2 361 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 BLOC1S6Q9UL45 172 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 TMCC3Q9ULS5 477 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 YIPF1Q9Y548 306 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 RGPD2P0DJD1 1756 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 KELP23276 732 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 PSMD8P48556 350 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 DSC2Q02487 901 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 PWP1Q13610 501 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 FASTKQ14296 549 aaKnown RBP15.12■□□□□ 0.01
C9orf47-201ENST00000334490 TRPC4APQ8TEL6 797 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 PLD4Q96BZ4 506 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ERVK-5Q9HDB9 667 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 SIX2Q9NPC8 291 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 CNTN3Q9P232 1028 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 NDUFAF1Q9Y375 327 aa15.12■□□□□ 0.01
C9orf47-201ENST00000334490 ALOX15BO15296 676 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 TBX18O95935 607 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 PRNPP04156 253 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CENPAP49450 140 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 HLA-DQA1Q5Y7H0 255 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CDCA2Q69YH5 1023 aaPredicted RBP15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ADAMTSL2Q86TH1 951 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 SYT12Q8IV01 421 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 FBXL18Q96ME1 805 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 TCRBV9S1A1TA0A576 114 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ATG7O95352 703 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ALADP13716 330 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CCNCP24863 283 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ERVK-21P61565 698 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CAP1Q01518 475 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 SCUBE1Q8IWY4 988 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 KYQ8NBH2 561 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 SLC9A7Q96T83 725 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 VWA7Q9Y334 891 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 PCDHGC4Q9Y5F7 938 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 FCHO1O14526 889 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ABHD2P08910 425 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CXCR2P25025 360 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 DGKGP49619 791 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 SLC16A1P53985 500 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 KRT78Q8N1N4 520 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 OR14C36Q8NHC7 312 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 UBE2E3Q969T4 207 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 FEM1CQ96JP0 617 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 RPL10LQ96L21 214 aaKnown RBP15.11■□□□□ 0.01
C9orf47-201ENST00000334490 TTYH3Q9C0H2 523 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 ABCG8Q9H221 673 aa15.11■□□□□ 0.01
C9orf47-201ENST00000334490 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms