RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SEMA5AQ13591 1074 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 SMAD1Q15797 465 aaKnown RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 MSS51Q4VC12 460 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 FBXO38Q6PIJ6 1188 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 PCDH20Q8N6Y1 951 aaKnown RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 CCDC26Q8TAB7 109 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 EDAQ92838 391 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 ARRDC3Q96B67 414 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 GDAP1L1Q96MZ0 367 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 GABRG3Q99928 467 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 EPHX3Q9H6B9 360 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 TRHDEQ9UKU6 1024 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 NUMA1Q14980 2115 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 CCDC78A2IDD5 438 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 DNALI1O14645 258 aaPredicted RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 MTSS1O43312 755 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 DCXO43602 365 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 TIMM44O43615 452 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 ALPIP09923 528 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 ELF2Q15723 593 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 PARP6Q2NL67 630 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 DENND5AQ6IQ26 1287 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 MPP5Q8N3R9 675 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 FRMD1Q8N878 549 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 NAT8LQ8N9F0 302 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 OR52K1Q8NGK4 314 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 UCMAQ8WVF2 138 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 PRCCQ92733 491 aaPredicted RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 KLHL32Q96NJ5 620 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 HHIPQ96QV1 700 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 TRIB3Q96RU7 358 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 VAT1Q99536 393 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
SHOX-201ENST00000334060 CEP44Q9C0F1 390 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 ITM2BQ9Y287 266 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 RAI2Q9Y5P3 530 aa16.68■□□□□ 0.26
SHOX-201ENST00000334060 FAM86C2PA6NEL3 165 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 FAM187AA6NFU0 413 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 IGSF6O95976 241 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
SHOX-201ENST00000334060 CTPS1P17812 591 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 ADRA1AP35348 466 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 PSMD8P48556 350 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 FNBP1LQ5T0N5 605 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 SUGP1Q8IWZ8 645 aaKnown RBP16.67■□□□□ 0.26
SHOX-201ENST00000334060 IFT81Q8WYA0 676 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 ISG20Q96AZ6 181 aaKnown RBP16.67■□□□□ 0.26
SHOX-201ENST00000334060 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.67■□□□□ 0.26
SHOX-201ENST00000334060 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
SHOX-201ENST00000334060 EDDM13A0A1B0GTR0 161 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 AURKAO14965 403 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 STK10O94804 968 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 GSRP00390 522 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 IL1BP01584 269 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 NNMTP40261 264 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 SNRPD1P62314 119 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 VSNL1P62760 191 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 MTAPQ13126 283 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 PTPRCAPQ14761 206 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 MAATS1Q7Z4T9 603 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 CAND1Q86VP6 1230 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 AADATQ8N5Z0 425 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 IL36AQ9UHA7 158 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 MID1O15344 667 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 SPINT1O43278 529 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 BUD23O43709 281 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 FZD6O60353 706 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 FAM153BP0C7A2 387 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 PLTPP55058 493 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 GEMIN4P57678 1058 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 LMNB2Q03252 620 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHOX-201ENST00000334060 CAMK2GQ13555 558 aaPredicted RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 CRY1Q16526 586 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 FAM153CQ494X1 144 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 HIBCHQ6NVY1 386 aaPredicted RBP16.66■□□□□ 0.26
SHOX-201ENST00000334060 TSSK4Q6SA08 328 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 KLHDC8BQ8IXV7 354 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 LPCAT1Q8NF37 534 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 PIP4K2CQ8TBX8 421 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 SEC14L1Q92503 715 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 HEPHQ9BQS7 1158 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 ZDHHC18Q9NUE0 388 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 PSD3Q9NYI0 1048 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 FAM153AQ9UHL3 310 aa16.66■□□□□ 0.26
SHOX-201ENST00000334060 TCRBV21S2A2A0A5A6 115 aa16.65■□□□□ 0.26
SHOX-201ENST00000334060 KPNA3O00505 521 aaPredicted RBP16.65■□□□□ 0.26
SHOX-201ENST00000334060 AP2A1O95782 977 aa16.65■□□□□ 0.26
SHOX-201ENST00000334060 NDUFV2P19404 249 aa16.65■□□□□ 0.26
SHOX-201ENST00000334060 SATB1Q01826 763 aa16.65■□□□□ 0.26
SHOX-201ENST00000334060 DMWDQ09019 674 aa16.65■□□□□ 0.26
SHOX-201ENST00000334060 CCDC38Q502W7 563 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms