RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CFAP157Q5JU67 520 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TSTD2Q5T7W7 516 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 NADSYN1Q6IA69 706 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 PRSS55Q6UWB4 352 aaPredicted RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 KIAA0408Q6ZU52 694 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 CRIPAKQ8N1N5 446 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 PGBD5Q8N414 524 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TDRD5Q8NAT2 981 aaKnown RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 C2orf15Q8WU43 125 aaKnown RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 MYEOVQ96EZ4 313 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TTPALQ9BTX7 342 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 MRPL9Q9BYD2 267 aaKnown RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 DCLRE1BQ9H816 532 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 PLA2G4CQ9UP65 541 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 A6NHS1 94 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TBKBP1A7MCY6 615 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TARM1B6A8C7 271 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 HOXA2O43364 376 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 ATF6P18850 670 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 ACVRL1P37023 503 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 ETFBP38117 255 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 ABL2P42684 1182 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 GRIA4P48058 902 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TAS2R39P59534 338 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 DNAL1Q4LDG9 190 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 EPGNQ6UW88 154 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 ARRDC2Q8TBH0 407 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 BCL7CQ8WUZ0 217 aaPredicted RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 TADA1Q96BN2 335 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 NXNL1Q96CM4 212 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 MOCOSQ96EN8 888 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 GPR78Q96P69 363 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 TMEM175Q9BSA9 504 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 DRC3Q9H069 523 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 C1orf21Q9H246 121 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 XPR1Q9UBH6 696 aa17.56■□□□□ 0.4
DDX28-201ENST00000332395 UXTQ9UBK9 157 aaPredicted RBP17.56■□□□□ 0.4
DDX28-201ENST00000332395 SLC38A8A6NNN8 435 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 AURKAO14965 403 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 CHRNGP07510 517 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 TACR2P21452 398 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 MAPKAPK2P49137 400 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 KCNQ1P51787 676 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 KPNA1P52294 538 aaPredicted RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 RAP1GDS1P52306 607 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 PRKAA2P54646 552 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 YBEYP58557 167 aaPredicted RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 LBRQ14739 615 aaKnown RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 ACSBG2Q5FVE4 666 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 CNSTQ6PJW8 725 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 AGR3Q8TD06 166 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 CALML6Q8TD86 181 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 WDR60Q8WVS4 1066 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 FAM161BQ96MY7 647 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 ILKAPQ9H0C8 392 aaPredicted RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 PAPSS2O95340 614 aaPredicted RBP17.55■□□□□ 0.4
DDX28-201ENST00000332395 MXRA7P84157 204 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 POU4F1Q01851 419 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 DLG1Q12959 904 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 SPATA6LQ8N4H0 392 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 OR13J1Q8NGT2 312 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 KCNV2Q8TDN2 545 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 ACSS2Q9NR19 701 aa17.55■□□□□ 0.4
DDX28-201ENST00000332395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
DDX28-201ENST00000332395 SLC12A2P55011 1212 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 MTA1Q13330 715 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 TAF11Q15544 211 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 TSNAXIP1Q2TAA8 658 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 SLC9B1Q4ZJI4 515 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 RBM20Q5T481 1227 aaKnown RBP17.54■□□□□ 0.4
DDX28-201ENST00000332395 FBXO22Q8NEZ5 403 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 MAPK15Q8TD08 544 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 NAF1Q96HR8 494 aaKnown RBP17.54■□□□□ 0.4
DDX28-201ENST00000332395 OMDQ99983 421 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 TTLL2Q9BWV7 592 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 MAN1C1Q9NR34 630 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 SPATS2LQ9NUQ6 558 aaKnown RBP17.54■□□□□ 0.4
DDX28-201ENST00000332395 RAP2CQ9Y3L5 183 aa17.54■□□□□ 0.4
DDX28-201ENST00000332395 A0A087X1B8 175 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 MROH6A6NGR9 719 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 MEI4A8MW99 385 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 F5H5T6 163 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 ADAM12O43184 909 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 DLX3O60479 287 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 PRAMEF11O60813 436 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 TM7SF2O76062 418 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 ATXN1LP0C7T5 689 aaKnown RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 NCF2P19878 526 aaPredicted RBP17.53■□□□□ 0.4
DDX28-201ENST00000332395 MPSTP25325 297 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 CPOXP36551 454 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 NUMBP49757 651 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 NAGLUP54802 743 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 ZNF789Q5FWF6 425 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 TMCO4Q5TGY1 634 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 SCUBE1Q8IWY4 988 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 LGI2Q8N0V4 545 aa17.53■□□□□ 0.4
DDX28-201ENST00000332395 GABPB2Q8TAK5 448 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms