RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 A0A1W2PQU0 124 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SLC30A4O14863 429 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 NEBLO76041 1014 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SERPINA4P29622 427 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 MAT2AP31153 395 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 MMP13P45452 471 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 GRIA4P48058 902 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 CSNK1EP49674 416 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 AP1S1P61966 158 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 POLR2LP62875 67 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 RPS21P63220 83 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 GBE1Q04446 702 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SLC45A4Q5BKX6 768 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 TFDP3Q5H9I0 405 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 RALGPS1Q5JS13 557 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 BRAT1Q6PJG6 821 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 LRRC8AQ8IWT6 810 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SYCE1Q8N0S2 351 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 RNF10Q8N5U6 811 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 TEX26Q8N6G2 289 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 PLD5Q8N7P1 536 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 EXD1Q8NHP7 514 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 RBM41Q96IZ5 413 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 ORAI3Q9BRQ5 295 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 RTKNQ9BST9 563 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 DESI2Q9BSY9 194 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 GTPBP2Q9BX10 602 aaKnown RBP14.17□□□□□ -0.14
LIMS1-201ENST00000332345 TSGA10Q9BZW7 698 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 AASDHPPTQ9NRN7 309 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 DTLQ9NZJ0 730 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 AMACRQ9UHK6 382 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 PCDHA3Q9Y5H8 950 aa14.17□□□□□ -0.14
LIMS1-201ENST00000332345 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 DMXL1Q9Y485 3027 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 A0A1W2PQ67 120 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CCDC66A2RUB6 948 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 C4orf47A7E2U8 309 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 PRAMEF26H0Y7S4 382 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CDX4O14627 284 aaPredicted RBP14.16□□□□□ -0.14
LIMS1-201ENST00000332345 PIGNO95427 931 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CCNB1P14635 433 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 TIMP2P16035 220 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CES1P23141 567 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CD38P28907 300 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CETN2P41208 172 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CDKN2BP42772 138 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 RGRP47804 291 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 NR2C2P49116 596 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 C21orf59P57076 290 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 COPS2P61201 443 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 PPP2CBP62714 309 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 PPP2CAP67775 309 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 ITKQ08881 620 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 SGCGQ13326 291 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 STAT4Q14765 748 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 PDK1Q15118 436 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 TAZQ16635 292 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 KIAA1161Q6NSJ0 714 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 SPOCD1Q6ZMY3 1216 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CAMK1DQ8IU85 385 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 VOPP1Q96AW1 172 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 HDAC11Q96DB2 347 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 RMDN1Q96DB5 314 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 NUDCD1Q96RS6 583 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 MGME1Q9BQP7 344 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 RBM22Q9NW64 420 aaKnown RBP eCLIP14.16□□□□□ -0.14
LIMS1-201ENST00000332345 DLL3Q9NYJ7 618 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 AMFRQ9UKV5 643 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 ANKRD6Q9Y2G4 727 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 SPTBN4Q9H254 2564 aa14.16□□□□□ -0.14
LIMS1-201ENST00000332345 ANKRD36A6QL64 1941 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 A0A1B0GVT2 93 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MACROD2A1Z1Q3 448 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 PPP1R12AO14974 1030 aaPredicted RBP14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MUSKO15146 869 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 VILLO15195 856 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 SLC31A1O15431 190 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 KRT86O43790 486 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 CST8O60676 142 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MAGEC1O60732 1142 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 OPHN1O60890 802 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 MAP3K6O95382 1288 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 AKT2P31751 481 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 CTNNA1P35221 906 aaKnown RBP14.15□□□□□ -0.14
LIMS1-201ENST00000332345 DYNLT1P63172 113 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 ELP6Q0PNE2 266 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 GRIK2Q13002 908 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 UGP2Q16851 508 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 ZNF284Q2VY69 593 aa14.15□□□□□ -0.14
LIMS1-201ENST00000332345 KAZNQ674X7 775 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms