RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 F5H423 210 aaPredicted RBP24.54■■□□□ 1.52
SOX1-201ENST00000330949 DDHD2O94830 711 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 KRT75O95678 551 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 CCDC14Q49A88 953 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 CES3Q6UWW8 571 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 VASH1Q7L8A9 365 aaPredicted RBP24.54■■□□□ 1.52
SOX1-201ENST00000330949 CSF3RQ99062 836 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 TBC1D13Q9NVG8 400 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 CCDC167Q9P0B6 97 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 DKK3Q9UBP4 350 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 PGAP2Q9UHJ9 254 aa24.54■■□□□ 1.52
SOX1-201ENST00000330949 EI24O14681 340 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 PRKCEQ02156 737 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 IQSEC1Q6DN90 963 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 GTF2IRD2BQ6EKJ0 949 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 PLEKHG7Q6ZR37 379 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 USP51Q70EK9 711 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 GTF2IRD2Q86UP8 949 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 ZNF668Q96K58 619 aaPredicted RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 SNRNP25Q9BV90 132 aaKnown RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 DNMT3BQ9UBC3 853 aaKnown RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 ANKRD6Q9Y2G4 727 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 FCGR1AP12314 374 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 LRPAP1P30533 357 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 TRIM32Q13049 653 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 MAPRE1Q15691 268 aaKnown RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 PGS1Q32NB8 556 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 COLGALT1Q8NBJ5 622 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.53■■□□□ 1.52
SOX1-201ENST00000330949 HTR3CQ8WXA8 447 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 NGRNQ9NPE2 291 aaKnown RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 MDM4O15151 490 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 S100BP04271 92 aaPredicted RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 CA9Q16790 459 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 C8orf82Q6P1X6 216 aaPredicted RBP24.53■■□□□ 1.52
SOX1-201ENST00000330949 HMGCLL1Q8TB92 370 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 LHPPQ9H008 270 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 TLK1Q9UKI8 766 aa24.53■■□□□ 1.52
SOX1-201ENST00000330949 ACOX3O15254 700 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 NRP2O60462 931 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 SNX17Q15036 470 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 DDIASQ8IXT1 998 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 M0QYV0 167 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 TPST1O60507 370 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 MICAL2O94851 1124 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 POLR2EP19388 210 aaKnown RBP24.52■■□□□ 1.52
SOX1-201ENST00000330949 RPS9P46781 194 aaKnown RBP24.52■■□□□ 1.52
SOX1-201ENST00000330949 DNASE1L3Q13609 305 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 SMUG1Q53HV7 270 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 LAYNQ6UX15 382 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 TMEM151AQ8N4L1 468 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 SCYL1Q96KG9 808 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 SPO11Q9Y5K1 396 aa24.52■■□□□ 1.52
SOX1-201ENST00000330949 ABCB7O75027 752 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 NAMPTP43490 491 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 PLCL1Q15111 1095 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 INAVAQ3KP66 663 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 XAF1Q6GPH4 301 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 TFAP2DQ7Z6R9 452 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 CMTR2Q8IYT2 770 aaKnown RBP24.51■■□□□ 1.51
SOX1-201ENST00000330949 VMP1Q96GC9 406 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 UBDO15205 165 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 EMC2Q15006 297 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 HSDL1Q3SXM5 330 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 OR6B2Q6IFH4 312 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 CXorf38Q8TB03 319 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 CALML6Q8TD86 181 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 FCRL3Q96P31 734 aaPredicted RBP24.51■■□□□ 1.51
SOX1-201ENST00000330949 LRRC40Q9H9A6 602 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 DOCK5Q9H7D0 1870 aa24.51■■□□□ 1.51
SOX1-201ENST00000330949 TMEM233B4DJY2 109 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 DEAF1O75398 565 aaPredicted RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 CHEK2O96017 543 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 SBK3P0C264 359 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 HDCP19113 662 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 HADHAP40939 763 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 TNFSF9P41273 254 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 ADAM17P78536 824 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 STYXQ8WUJ0 223 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 TRIB2Q92519 343 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 ZNF669Q96BR6 464 aaPredicted RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 ROPN1LQ96C74 230 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 XYLT2Q9H1B5 865 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 THG1LQ9NWX6 298 aaKnown RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 GDAP2Q9NXN4 497 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 RGS13O14921 159 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 SYNCRIPO60506 623 aaKnown RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 GPD2P43304 727 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 PTPN9P43378 593 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 PLA2G16P53816 162 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 CSE1LP55060 971 aaKnown RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 PTPN11Q06124 597 aaPredicted RBP24.5■■□□□ 1.51
SOX1-201ENST00000330949 CXCL9Q07325 125 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 SPCS2Q15005 226 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 CRTC3Q6UUV7 619 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 AGAP2Q99490 1192 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 ATP13A3Q9H7F0 1226 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.5■■□□□ 1.51
SOX1-201ENST00000330949 MTRRQ9UBK8 725 aa24.5■■□□□ 1.51
SOX1-201ENST00000330949 DGKBQ9Y6T7 804 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms