RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LMO2P25791 158 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CORO1AP31146 461 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 SLC25A3Q00325 362 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 PRKCZQ05513 592 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 NEDD8Q15843 81 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FAM45BPQ6NSW5 357 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 TSHZ1Q6ZSZ6 1077 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CDH24Q86UP0 819 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 EID3Q8N140 333 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CDYL2Q8N8U2 506 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FAM45AQ8TCE6 357 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 COG5Q9UP83 839 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 TOMM70O94826 608 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 SEC13P55735 322 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 IRF8Q02556 426 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FSTL1Q12841 308 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FAM110CQ1W6H9 321 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 LBX2Q6XYB7 198 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 PARGQ86W56 976 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 VPS33AQ96AX1 596 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 LINGO1Q96FE5 620 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 INPP4AQ96PE3 977 aaPredicted RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 C1QTNF7Q9BXJ2 289 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 MYH6P13533 1939 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CYP1A1P04798 512 aaPredicted RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 RPL14P50914 215 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 SLC5A3P53794 718 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ATXN1P54253 815 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 SLC25A52Q3SY17 297 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ANKRD23Q86SG2 305 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ALYREFQ86V81 257 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FFAR2O15552 330 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 SEMG2Q02383 582 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 KYAT3Q6YP21 454 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 ST13P5Q8NFI4 369 aaPredicted RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 CAPNS2Q96L46 248 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 NLNQ9BYT8 704 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 TLE6Q9H808 572 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CCL22O00626 93 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CD3EAPO15446 510 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 SEPT4O43236 478 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 STBD1O95210 358 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 IFNA16P05015 189 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 POLD2P49005 469 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CSNK2BP67870 215 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 MAD2L1Q13257 205 aaPredicted RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 AUHQ13825 339 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 XKR6Q5GH73 641 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 TMPRSS6Q8IU80 811 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 IRF2BP1Q8IU81 584 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 CENPTQ96BT3 561 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 MBOAT7Q96N66 472 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ZNF670Q9BS34 389 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 MRPS26Q9BYN8 205 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 DAPK2Q9UIK4 370 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 R3HDM2Q9Y2K5 976 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 GSAPA4D1B5 854 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 MFSD11O43934 449 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 SLC25A14O95258 325 aaPredicted RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 RPN2P04844 631 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ANXA5P08758 320 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 SNHG28P0DPA3 235 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 PIK3CGP48736 1102 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 HYIQ5T013 277 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 FNBP1LQ5T0N5 605 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 HLA-DQA1Q5Y7H0 255 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 OR8H2Q8N162 312 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 TOP6BLQ8N6T0 577 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 RHOBTB2Q9BYZ6 727 aa10.25□□□□□ -0.77
CHD3-201ENST00000330494 DDX18Q9NVP1 670 aaKnown RBP10.25□□□□□ -0.77
CHD3-201ENST00000330494 IQCF5A8MTL0 148 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 GLUD1P00367 558 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 HSPA13P48723 471 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 NEK3P51956 506 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 MTA1Q13330 715 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 LRRC73Q5JTD7 316 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 AFTPHQ6ULP2 937 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 STAG3L4Q8TBR4 150 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 C12orf65Q9H3J6 166 aaKnown RBP10.24□□□□□ -0.77
CHD3-201ENST00000330494 MYH8P13535 1937 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 NPEPPSL1A6NEC2 478 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 C9IYK1 514 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 EPN2O95208 641 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 GJA9P57773 515 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 RAB10P61026 200 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 ACSM2AQ08AH3 577 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 TUSC3Q13454 348 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 ACSM2BQ68CK6 577 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 PRSS55Q6UWB4 352 aaPredicted RBP10.24□□□□□ -0.77
CHD3-201ENST00000330494 RNF44Q7L0R7 432 aa10.24□□□□□ -0.77
CHD3-201ENST00000330494 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms