RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NSUN2Q08J23 767 aaKnown RBP eCLIP14.7□□□□□ -0.06
TPM3-206ENST00000330188 LSM12Q3MHD2 195 aaKnown RBP14.7□□□□□ -0.06
TPM3-206ENST00000330188 CTXN3Q4LDR2 81 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 ZNF789Q5FWF6 425 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 ARMC3Q5W041 872 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 ZNF280DQ6N043 979 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 RNF180Q86T96 592 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 LMNTD2Q8IXW0 634 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 KBTBD2Q8IY47 623 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 DEFB107AQ8IZN7 70 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 TEX26Q8N6G2 289 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 HEXDCQ8WVB3 486 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 STON2Q8WXE9 905 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 IGSF8Q969P0 613 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 PABPC5Q96DU9 382 aaKnown RBP14.7□□□□□ -0.06
TPM3-206ENST00000330188 BTN2A3PQ96KV6 586 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 PPP1R36Q96LQ0 422 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 RTKNQ9BST9 563 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 OSBPL1AQ9BXW6 950 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 SP110Q9HB58 689 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 RNF186Q9NXI6 227 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 ARHGAP26Q9UNA1 814 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 GREB1Q4ZG55 1949 aa14.7□□□□□ -0.06
TPM3-206ENST00000330188 SOAT2O75908 522 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 SMNDC1O75940 238 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPM3-206ENST00000330188 CD1EP15812 388 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 EPHA3P29320 983 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 EPHB1P54762 984 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TRIP4Q15650 581 aaPredicted RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 ZRSR2Q15696 482 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 FBXL22Q6P050 247 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 PDCD6IPQ8WUM4 868 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 FAM136AQ96C01 138 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 CNDP1Q96KN2 507 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 LENG8Q96PV6 779 aaPredicted RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 FAM193BQ96PV7 902 aaPredicted RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 MRPL57Q9BQC6 102 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 VPS45Q9NRW7 570 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 IGSF5Q9NSI5 407 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPM3-206ENST00000330188 VTI1BQ9UEU0 232 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 PPM1HQ9ULR3 514 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 SSX2IPQ9Y2D8 614 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 SLCO1B7G3V0H7 640 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 MAP3K7O43318 606 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 NPHS1O60500 1241 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 YWHAQP27348 245 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 PIK3R1P27986 724 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 LEPRP48357 1165 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 SLC12A2P55011 1212 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TNK2Q07912 1038 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 ASPHQ12797 758 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 MRPL58Q14197 206 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 MAP3K21Q5TCX8 1036 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 RAP1GAP2Q684P5 730 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 AAGABQ6PD74 315 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 SPNS2Q8IVW8 549 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 PGBD5Q8N414 524 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TXNDC5Q8NBS9 432 aaKnown RBP14.69□□□□□ -0.06
TPM3-206ENST00000330188 OR13J1Q8NGT2 312 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 CALML6Q8TD86 181 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 FBXO32Q969P5 355 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TADA1Q96BN2 335 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TTC1Q99614 292 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 OLFM1Q99784 485 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 ZNF385DQ9H6B1 395 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 DONSONQ9NYP3 566 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 CLIC5Q9NZA1 410 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 LRCH1Q9Y2L9 728 aa14.69□□□□□ -0.06
TPM3-206ENST00000330188 TTC24A2A3L6 582 aaPredicted RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 EIF4E1BA6NMX2 242 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 PAPSS2O95340 614 aaPredicted RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 JUNP05412 331 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 PDHA1P08559 390 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 SERPINB5P36952 375 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 TBL3Q12788 808 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 CCNIQ14094 377 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 ACAD11Q709F0 780 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 MIB1Q86YT6 1006 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 CCNYL1Q8N7R7 359 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 ARRDC2Q8TBH0 407 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 NDNQ99608 321 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 S100A14Q9HCY8 104 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 NDE1Q9NXR1 346 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 DRGXA6NNA5 263 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 IGLV3-27P01718 113 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 HMBSP08397 361 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 CLCN5P51795 746 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 KPNA2P52292 529 aaKnown RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 DNAJB13P59910 316 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 TAF10Q12962 218 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 CSHL1Q14406 222 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 TECRLQ5HYJ1 363 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
TPM3-206ENST00000330188 ZNF354CQ86Y25 554 aa14.68□□□□□ -0.06
TPM3-206ENST00000330188 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms