RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GAB3Q8WWW8 586 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 TTC17Q96AE7 1141 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 ALG14Q96F25 216 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 MRGPRX3Q96LB0 322 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 MKRN2Q9H000 416 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 TMEM245Q9H330 911 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 CDC42EP4Q9H3Q1 356 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 XAB2Q9HCS7 855 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 RAB6BQ9NRW1 208 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 GOLGA6CA6NDK9 693 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 TIMM44O43615 452 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 GSTA2P09210 222 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 GOLGA6DP0CG33 693 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 NDUFV2P19404 249 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 PHBP35232 272 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 CDH18Q13634 790 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 SLC29A2Q14542 456 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 STAT4Q14765 748 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 DNAJC21Q5F1R6 531 aaKnown RBP16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 PITRM1Q5JRX3 1037 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 CEP85LQ5SZL2 805 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 AHI1Q8N157 1196 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 UMODL1-AS1Q8N2C9 162 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 TMEM248Q9NWD8 314 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 GOLGA6AQ9NYA3 693 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 ZNF212Q9UDV6 495 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 SLCO3A1Q9UIG8 710 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 MBD1Q9UIS9 605 aaPredicted RBP16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 OR51B4Q9Y5P0 310 aa16.68■□□□□ 0.26
PDLIM1-201ENST00000329399 DLDP09622 509 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TGM1P22735 817 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 ATP5DP30049 168 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 MAPKAPK2P49137 400 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 STK19P49842 368 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 YBEYP58557 167 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 EIF4HQ15056 248 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 MAP7D1Q3KQU3 841 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 PLEKHG6Q3KR16 790 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 CCDC13Q8IYE1 715 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 PGM2Q96G03 612 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 RPL10LQ96L21 214 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 MRGPRX1Q96LB2 322 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 DUSP15Q9H1R2 295 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 EPB41L4BQ9H329 900 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TMBIM4Q9HC24 238 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 HAUS2Q9NVX0 235 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 FETUBQ9UGM5 382 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 NEU3Q9UQ49 428 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 A0A1B0GVM2 712 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TCAF2A6NFQ2 919 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 E7EVH7 732 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 RNF103O00237 685 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 CNR2P34972 360 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 COPAP53621 1224 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 ZNF844Q08AG5 666 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 PLK5Q496M5 336 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 FNDC3BQ53EP0 1204 aaKnown RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 RABGAP1LQ5R372 815 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TTC39BQ5VTQ0 682 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 ARMC3Q5W041 872 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 SDE2Q6IQ49 451 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 CEP68Q76N32 757 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 TFAP2DQ7Z6R9 452 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 CCNJLQ8IV13 435 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 PGBD3Q8N328 593 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 UCMAQ8WVF2 138 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 SERPINB12Q96P63 405 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 LGMNQ99538 433 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 FEM1AQ9BSK4 669 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 SAYSD1Q9NPB0 183 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 PARD6AQ9NPB6 346 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 NDFIP2Q9NV92 336 aa16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 KIAA1522Q9P206 1035 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 BCCIPQ9P287 314 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDLIM1-201ENST00000329399 NUMA1Q14980 2115 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 MUC22E2RYF6 1773 aaPredicted RBP16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 A0A0D9SEW6 157 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 ARHGAP42A6NI28 874 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 TTC34A8MYJ7 566 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 H3BQF6 201 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 EPHX1P07099 455 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 P2RY2P41231 377 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 RASA2Q15283 850 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 CCDC6Q16204 474 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 CCDC38Q502W7 563 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 TEX44Q53QW1 395 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 SERPINA13PQ6UXR4 307 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 PRUNE1Q86TP1 453 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 NLRP14Q86W24 1093 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 ATPAF2Q8N5M1 289 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 ARFGAP2Q8N6H7 521 aa16.66■□□□□ 0.26
PDLIM1-201ENST00000329399 ATP11CQ8NB49 1132 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms