RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 PGBD2Q6P3X8 592 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 C19orf48Q6RUI8 117 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 KLHL17Q6TDP4 642 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 CCDC129Q6ZRS4 1044 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 RASGRP2Q7LDG7 609 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 FSIP1Q8NA03 581 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 ZMIZ2Q8NF64 920 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 TRIB2Q92519 343 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 C3orf49Q96BT1 292 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF334Q9HCZ1 680 aaPredicted RBP3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 DDX43Q9NXZ2 648 aaKnown RBP3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 SMARCAL1Q9NZC9 954 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 TCF19Q9Y242 345 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 CLDN16Q9Y5I7 305 aa3.08□□□□□ -1.92
CBX3P1-201ENST00000325243 A0A087WV62 115 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 hDV102S1A0JD36 115 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 FAM72CH0Y354 149 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 SKAP2O75563 359 aaPredicted RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 CLDN14O95500 239 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 LINC00271P0C7V0 271 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 PDIA3P30101 505 aaKnown RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 HOXC13P31276 330 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 PNPLA4P41247 253 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 CENPAP49450 140 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 FUT6P51993 359 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 THOC5Q13769 683 aaKnown RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 LPIN1Q14693 890 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ACCSLQ4AC99 568 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 FAM72AQ5TYM5 149 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF772Q68DY9 489 aaPredicted RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 FAM72DQ6L9T8 149 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 SLC26A9Q7LBE3 791 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 FAM72BQ86X60 149 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 CCDC117Q8IWD4 279 aaPredicted RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF501Q96CX3 271 aaPredicted RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 LRFN5Q96NI6 719 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 CSF3RQ99062 836 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 MMTAG2Q9BU76 263 aaKnown RBP3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ARNT2Q9HBZ2 717 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 NLRC4Q9NPP4 1024 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ATP8A2Q9NTI2 1148 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF224Q9NZL3 707 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 OR6C3Q9NZP0 311 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 NLKQ9UBE8 527 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 KCND3Q9UK17 655 aa3.07□□□□□ -1.92
CBX3P1-201ENST00000325243 IGKV3D-15A0A087WSY6 115 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SEPT4O43236 478 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 BAG4O95429 457 aaKnown RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 CBX6O95503 412 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 ATP1A1P05023 1023 aaKnown RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 DHRS4L1P0CG22 281 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 CETPP11597 493 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 CTPS1P17812 591 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 MCM2P49736 904 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SLC18A2Q05940 514 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 BYSLQ13895 437 aaKnown RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 CAPSQ13938 189 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SMAD1Q15797 465 aaKnown RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 RUNDC3AQ59EK9 446 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 TANGO2Q6ICL3 276 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 GGT6Q6P531 493 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SATL1Q86VE3 508 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 DENND6AQ8IWF6 608 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 MB21D2Q8IYB1 491 aaPredicted RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SETD9Q8NE22 299 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 LNX1Q8TBB1 728 aaPredicted RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 NCSTNQ92542 709 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 FIG4Q92562 907 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 ANKRD9Q96BM1 317 aaPredicted RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 TRAPPC9Q96Q05 1148 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 PLEKHA2Q9HB19 425 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 FBRSL1Q9HCM7 1045 aaKnown RBP3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 PAM16Q9Y3D7 125 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 SNX9Q9Y5X1 595 aa3.06□□□□□ -1.92
CBX3P1-201ENST00000325243 GREB1LQ9C091 1923 aaPredicted RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF587BE7ETH6 402 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 WNT9BO14905 357 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 IL1AP01583 271 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 KRT18P05783 430 aaKnown RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 MYL1P05976 194 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 KRT5P13647 590 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 NR0B1P51843 470 aaKnown RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 ARHGAP8P85298 464 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 ZNF155Q12901 538 aaPredicted RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 PDCLQ13371 301 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 IL13RA2Q14627 380 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 AP5B1Q2VPB7 878 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 GJB7Q6PEY0 223 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 SYNE3Q6ZMZ3 975 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 CCDC105Q8IYK2 499 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 OR13A1Q8NGR1 328 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 RASSF8Q8NHQ8 419 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 SPATA22Q8NHS9 363 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 TAS1R2Q8TE23 839 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 RNF183Q96D59 192 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 KTI12Q96EK9 354 aaPredicted RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 C3orf30Q96M34 536 aa3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 ELAC2Q9BQ52 826 aaKnown RBP3.05□□□□□ -1.92
CBX3P1-201ENST00000325243 HERC2P3Q9BVR0 1158 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms