RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FMO4P31512 558 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 TRIM25Q14258 630 aaKnown RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 GALNT3Q14435 633 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PSMD5Q16401 504 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 IQSEC1Q6DN90 963 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PHTF2Q8N3S3 785 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 BPIFB6Q8NFQ5 453 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 UBAP1Q9NZ09 502 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 MYO1GB0I1T2 1018 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 HSPA1AP0DMV8 641 aaKnown RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 HSPA1BP0DMV9 641 aaKnown RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 ATP6V1B2P21281 511 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 L1CAMP32004 1257 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 GRK4P32298 578 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 CYP51A1Q16850 503 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 C11orf91Q3C1V1 193 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PPM1LQ5SGD2 360 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 C4orf22Q6V702 233 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 KYAT3Q6YP21 454 aaKnown RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 MILR1Q7Z6M3 343 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 STK32CQ86UX6 486 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 DSELQ8IZU8 1212 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 NXNL1Q96CM4 212 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 TBL1YQ9BQ87 522 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 NAV1Q8NEY1 1877 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 NRP1O14786 923 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 RAMP2O60895 175 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PSME3P61289 254 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PRKD1Q15139 912 aaPredicted RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 GRTP1Q5TC63 336 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 ELMO1Q92556 727 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 HDAC10Q969S8 669 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 PCDHAC1Q9H158 963 aa15.39■□□□□ 0.05
VARS2-201ENST00000321897 C6orf203Q9P0P8 240 aaPredicted RBP15.39■□□□□ 0.05
VARS2-201ENST00000321897 DLDP09622 509 aaKnown RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 XRCC1P18887 633 aaPredicted RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 SH3D19Q5HYK7 790 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 GK5Q6ZS86 529 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FRMD7Q6ZUT3 714 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 ZDHHC17Q8IUH5 632 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FTHL17Q9BXU8 183 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 APOA1P02647 267 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 CCDC159P0C7I6 412 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 PCNAP12004 261 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FASP25445 335 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 RAD23AP54725 363 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 POU4F1Q01851 419 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 C15orf39Q6ZRI6 1047 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 CARNMT1Q8N4J0 409 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 DHRSXQ8N5I4 330 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 LRRC39Q96DD0 335 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 CINPQ9BW66 212 aaPredicted RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 CASS4Q9NQ75 786 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 PLK2Q9NYY3 685 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 MOSPD1Q9UJG1 213 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 ADAMTS6Q9UKP5 1117 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FZD9O00144 591 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 TYROBPO43914 113 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 BEST1O76090 585 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FGFR1P11362 822 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 TFEBP19484 476 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 PSMB9P28065 219 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 AKT1P31749 480 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 CACUL1Q86Y37 369 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 TDRPQ86YL5 185 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 PQLC3Q8N755 202 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 LRTOMTQ8WZ04 291 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 C12orf42Q96LP6 360 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 RNF145Q96MT1 663 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 THUMPD3Q9BV44 507 aaKnown RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 RERGLQ9H628 205 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 EXOSC4Q9NPD3 245 aaKnown RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 SEPT3Q9UH03 358 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 CROTQ9UKG9 612 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 FBXO5Q9UKT4 447 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 RGSL1A5PLK6 1076 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 TOR1BO14657 336 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 STT3AP46977 705 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 INPP1P49441 399 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 GTF2H3Q13889 308 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 SLC26A9Q7LBE3 791 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 DCP1BQ8IZD4 617 aaKnown RBP15.38■□□□□ 0.05
VARS2-201ENST00000321897 LGI2Q8N0V4 545 aa15.38■□□□□ 0.05
VARS2-201ENST00000321897 NUMA1Q14980 2115 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 OR51F1A6NGY5 319 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 C16orf96A6NNT2 1141 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TMEM233B4DJY2 109 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 PMM2O15305 246 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 PAGE1O75459 146 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TCEA3O75764 348 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 FBXO21O94952 628 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 PRKCGP05129 697 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 LRPAP1P30533 357 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 PPARGP37231 505 aaPredicted RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 SERPINB10P48595 397 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms