RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SETD4Q9NVD3 440 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 ADAMTS5Q9UNA0 930 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 ZNF638Q14966 1978 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 EEF2KO00418 725 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 DLGAP1O14490 977 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 NPHS1O60500 1241 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 NOL3O60936 208 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 ARIH2O95376 493 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 AHSGP02765 367 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 PGK2P07205 417 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 HALP42357 657 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 FRG1Q14331 258 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 PRPSAP1Q14558 356 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 PIWIL4Q7Z3Z4 852 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 EXOC8Q8IYI6 725 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 MFSD2AQ8NA29 543 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 SHCBP1Q8NEM2 672 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 COPS5Q92905 334 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 SLC35B4Q969S0 331 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 FTHL17Q9BXU8 183 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 LRRC4Q9HBW1 653 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 PRMT7Q9NVM4 692 aaPredicted RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 ARMC1Q9NVT9 282 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 TRNAU1APQ9NX07 287 aaKnown RBP18.05■□□□□ 0.48
PRKCB-202ENST00000321728 NME7Q9Y5B8 376 aa18.05■□□□□ 0.48
PRKCB-202ENST00000321728 PSME4Q14997 1843 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 PARP14Q460N5 1801 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 CLOCKO15516 846 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 DCKP27707 260 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 TTKP33981 857 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 TRAF2Q12933 501 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 CEP97Q8IW35 865 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 PACRGLQ8N7B6 248 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 MUC3BQ9H195 1237 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 MRPL46Q9H2W6 279 aaKnown RBP18.04■□□□□ 0.48
PRKCB-202ENST00000321728 SNX25Q9H3E2 840 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 CLASP2O75122 1294 aaKnown RBP18.04■□□□□ 0.48
PRKCB-202ENST00000321728 PGK1P00558 417 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 RXRGP48443 463 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 NPY2RP49146 381 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 BMXP51813 675 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 RAB10P61026 200 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 PITX1P78337 314 aaPredicted RBP18.04■□□□□ 0.48
PRKCB-202ENST00000321728 NME3Q13232 169 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 CTBP1Q13363 440 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 KCTD8Q6ZWB6 473 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 RPS27LQ71UM5 84 aaKnown RBP18.04■□□□□ 0.48
PRKCB-202ENST00000321728 SPPL2CQ8IUH8 684 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 EPHX4Q8IUS5 362 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 MLPHQ9BV36 600 aaPredicted RBP18.04■□□□□ 0.48
PRKCB-202ENST00000321728 OSBPL2Q9H1P3 480 aa18.04■□□□□ 0.48
PRKCB-202ENST00000321728 EVPLQ92817 2033 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 PHIPQ8WWQ0 1821 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CYP2C8P10632 490 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 STMN1P16949 149 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CYP2B6P20813 491 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 MATKP42679 507 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 GMPSP49915 693 aaPredicted RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CSRP3P50461 194 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 MPP1Q00013 466 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 NR1D2Q14995 579 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 INTS11Q5TA45 600 aaKnown RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 NT5DC4Q86YG4 428 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 DENND6AQ8IWF6 608 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 AFAP1L2Q8N4X5 818 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CCM2LQ9NUG4 571 aaPredicted RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 NSMCE4AQ9NXX6 385 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 EGFL7Q9UHF1 273 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 TLL2Q9Y6L7 1015 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 DHRS12A0PJE2 317 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 ZNF182P17025 639 aaPredicted RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CDH3P22223 829 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 IL10P22301 178 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 BST2Q10589 180 aaKnown RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 MOGQ16653 247 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 SLC36A3Q495N2 470 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 ANKRD26P1Q6NSI1 321 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CHST15Q7LFX5 561 aaPredicted RBP18.03■□□□□ 0.48
PRKCB-202ENST00000321728 TERB1Q8NA31 727 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 GPR78Q96P69 363 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 DOK1Q99704 481 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 AS3MTQ9HBK9 375 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 MRGBPQ9NV56 204 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 LCTP09848 1927 aa18.03■□□□□ 0.48
PRKCB-202ENST00000321728 SSC5DA1L4H1 1573 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 RLFQ13129 1914 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 PPEF2O14830 753 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 ADAM23O75077 832 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 INHBBP09529 407 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 NFKB1P19838 968 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 FASP25445 335 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 MAP4P27816 1152 aaKnown RBP18.02■□□□□ 0.48
PRKCB-202ENST00000321728 BTG3Q14201 252 aaPredicted RBP18.02■□□□□ 0.48
PRKCB-202ENST00000321728 PAFAH1B3Q15102 231 aaKnown RBP18.02■□□□□ 0.48
PRKCB-202ENST00000321728 SLC25A52Q3SY17 297 aa18.02■□□□□ 0.48
PRKCB-202ENST00000321728 FAM45BPQ6NSW5 357 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms