RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TMEM109Q9BVC6 243 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 COG4Q9H9E3 785 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CATSPERZQ9NTU4 200 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 EVLQ9UI08 416 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 AGO1Q9UL18 857 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 BCORQ6W2J9 1755 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PEX1O43933 1283 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 MGEA5O60502 916 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 HLA-DQB2P05538 268 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 APOA4P06727 396 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 PFKMP08237 780 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TPBGLP0DKB5 382 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 THRAP10827 490 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 RPL14P50914 215 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 BCL2L1Q07817 233 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 KCNJ11Q14654 390 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ALFQ53S48 1182 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CAPRIN2Q6IMN6 1127 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 MARK2Q7KZI7 788 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF366Q8N895 744 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF781Q8N8C0 355 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 METTL6Q8TCB7 284 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 BTN2A3PQ96KV6 586 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SEPHS2Q99611 448 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 C1orf50Q9BV19 199 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 EPB41L4BQ9H329 900 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 COPG2Q9UBF2 871 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 VWA7Q9Y334 891 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TIMM22Q9Y584 194 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 AMHP03971 560 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 MPOP05164 745 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ITGALP20701 1170 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 KLC1Q07866 573 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 MED21Q13503 144 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 NPWQ8N729 165 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CDYL2Q8N8U2 506 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CCDC138Q96M89 665 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 GBA3Q9H227 469 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ACTR8Q9H981 624 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 LGALS13Q9UHV8 139 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ARL5AQ9Y689 179 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SNAP91O60641 907 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CXCL14O95715 111 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TPSB2P20231 275 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CYP4F8P98187 520 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TPSAB1Q15661 275 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SERINC5Q86VE9 423 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SLC44A2Q8IWA5 706 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SPPL2BQ8TCT7 592 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SEC14L1Q92503 715 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CNBD2Q96M20 576 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 MLPHQ9BV36 600 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 GATA5Q9BWX5 397 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CNTN6Q9UQ52 1028 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 NUP205Q92621 2012 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 AGRPO00253 132 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CCL16O15467 120 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 PRPF4O43172 522 aaKnown RBP eCLIP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 LZTS3O60299 673 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 PLIN3O60664 434 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TACR2P21452 398 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 KCNK10P57789 538 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 UPP1Q16831 310 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 UBXN11Q5T124 520 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 BNC2Q6ZN30 1099 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 FNDC5Q8NAU1 212 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 RBM15BQ8NDT2 890 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 FAM13CQ8NE31 585 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 UROC1Q96N76 676 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 SMG9Q9H0W8 520 aaKnown RBP11.09□□□□□ -0.63
TOP3A-201ENST00000321105 CFAP97Q9P2B7 532 aa11.09□□□□□ -0.63
TOP3A-201ENST00000321105 TRPC5OSA6NMA1 111 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 ABLIM1O14639 778 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.649e-6■■■■□ 24.8
TOP3A-201ENST00000321105 MZF1P28698 734 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 SLC11A1P49279 550 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 PFKPQ01813 784 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 FASTKQ14296 549 aaKnown RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 CBX2Q14781 532 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-201ENST00000321105 RNF43Q68DV7 783 aa11.08□□□□□ -0.64
TOP3A-201ENST00000321105 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms