RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 KRT86O43790 486 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 CST8O60676 142 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 GJB3O75712 270 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 FTCDO95954 541 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 ENGP17813 658 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 CSNK1DP48730 415 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 MAXP61244 160 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 AP1S1P61966 158 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 BCL2L1Q07817 233 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 AP1B1Q10567 949 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SLC10A2Q12908 348 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SETMARQ53H47 684 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-201ENST00000320936 CCDC181Q5TID7 509 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 TTC7BQ86TV6 843 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 TRIM69Q86WT6 500 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 CAMK1DQ8IU85 385 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 CCDC13Q8IYE1 715 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.92■□□□□ 0.62
CIRBP-201ENST00000320936 LRRC57Q8N9N7 239 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 KLK6Q92876 244 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 RAB7BQ96AH8 199 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SERAC1Q96JX3 654 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SLC6A18Q96N87 628 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SUV39H2Q9H5I1 410 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 TM9SF3Q9HD45 589 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 RXFP3Q9NSD7 469 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 TPX2Q9ULW0 747 aaKnown RBP18.92■□□□□ 0.62
CIRBP-201ENST00000320936 ITM2BQ9Y287 266 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 SLCO1B1Q9Y6L6 691 aa18.92■□□□□ 0.62
CIRBP-201ENST00000320936 DOCK9Q9BZ29 2069 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 A0A1W2PPC4 97 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PPP1R12AO14974 1030 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PEX11BO96011 259 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 SYPP08247 313 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PRLRP16471 622 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 CCNCP24863 283 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 ABL2P42684 1182 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 CCZ1BP86790 482 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 CCZ1P86791 482 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 NSUN2Q08J23 767 aaKnown RBP eCLIP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PDK1Q15118 436 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 RSPO4Q2I0M5 234 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 LAYNQ6UX15 382 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PGBD5Q8N414 524 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 NETO1Q8TDF5 533 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PDCD6IPQ8WUM4 868 aaKnown RBP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 HDAC11Q96DB2 347 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 ZNF641Q96N77 438 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-201ENST00000320936 LGMNQ99538 433 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 MYOCQ99972 504 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 CAPN10Q9HC96 672 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 TMEM9BQ9NQ34 198 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 SEPT10Q9P0V9 454 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PCDHA3Q9Y5H8 950 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 FADS3Q9Y5Q0 445 aa18.91■□□□□ 0.62
CIRBP-201ENST00000320936 PCDH15Q96QU1 1955 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-201ENST00000320936 MATN3O15232 486 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CCNB1P14635 433 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CTNNA2P26232 953 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CETN2P41208 172 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CSNK1EP49674 416 aaKnown RBP18.9■□□□□ 0.62
CIRBP-201ENST00000320936 RWDD2BP57060 319 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 C21orf59P57076 290 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 GRIK2Q13002 908 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 HNRNPDQ14103 355 aaKnown RBP18.9■□□□□ 0.62
CIRBP-201ENST00000320936 SEL1L3Q68CR1 1132 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 NEK5Q6P3R8 708 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 NT5DC3Q86UY8 548 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 HORMAD1Q86X24 394 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 HAUS1Q96CS2 278 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 TSGA13Q96PP4 275 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 MGME1Q9BQP7 344 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 HEMGNQ9BXL5 484 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 POLR1EQ9GZS1 481 aaKnown RBP18.9■□□□□ 0.62
CIRBP-201ENST00000320936 LZTFL1Q9NQ48 299 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 RBM22Q9NW64 420 aaKnown RBP eCLIP18.9■□□□□ 0.628e-6■□□□□ 10.3
CIRBP-201ENST00000320936 DKK3Q9UBP4 350 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 GGT7Q9UJ14 662 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 PACSIN2Q9UNF0 486 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CAPN6Q9Y6Q1 641 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 TRPM6Q9BX84 2022 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 CACNA1EQ15878 2313 aa18.9■□□□□ 0.62
CIRBP-201ENST00000320936 A0A1B0GVT2 93 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 UPK3BL1B0FP48 263 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 UPK3BL2E5RIL1 263 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 KCNK1O00180 336 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 ARHGAP33O14559 1287 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 SLC31A1O15431 190 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 LATO43561 262 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 AP1G1O43747 822 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 TGM2P21980 687 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 NUDT1P36639 197 aa18.89■□□□□ 0.61
CIRBP-201ENST00000320936 RPS21P63220 83 aaKnown RBP18.89■□□□□ 0.61
CIRBP-201ENST00000320936 RACK1P63244 317 aaKnown RBP18.89■□□□□ 0.61
CIRBP-201ENST00000320936 PPIDQ08752 370 aaKnown RBP18.89■□□□□ 0.61
CIRBP-201ENST00000320936 PPP2R5EQ16537 467 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms