RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 ZNF222Q9UK12 451 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 SMIM30A4D0T7 59 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 BCL10O95999 233 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 GGT5P36269 586 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 BUD31P41223 144 aaPredicted RBP8.9□□□□□ -0.98
SSBP2-201ENST00000320672 CEBPGP53567 150 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 MXD1Q05195 221 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 PRKAA1Q13131 559 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 ANKRD22Q5VYY1 191 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 RIBC1Q8N443 379 aaPredicted RBP8.9□□□□□ -0.98
SSBP2-201ENST00000320672 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 ZCCHC10Q8TBK6 192 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 MAML3Q96JK9 1138 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 OSBPL2Q9H1P3 480 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 ZDHHC4Q9NPG8 344 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 CDH9Q9ULB4 789 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 PCDHGA3Q9Y5H0 932 aa8.9□□□□□ -0.98
SSBP2-201ENST00000320672 CFAP20Q9Y6A4 193 aaKnown RBP8.9□□□□□ -0.98
SSBP2-201ENST00000320672 PTPRUQ92729 1446 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 SLC35F4A4IF30 521 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 MTX2O75431 263 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 PSMD10O75832 226 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 KRT6AP02538 564 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 KRT6BP04259 564 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 SOX6P35712 828 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 KRT6CP48668 564 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 RHBDL3P58872 404 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 PCSK9Q8NBP7 692 aaKnown RBP8.9□□□□□ -0.99
SSBP2-201ENST00000320672 NRDE2Q9H7Z3 1164 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 IPPQ9Y573 584 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 A8MUA0 341 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 SNPHO15079 494 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 VCLP18206 1134 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 PGGT1BP53609 377 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 RHAGQ02094 409 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 PSTKQ8IV42 348 aaKnown RBP8.9□□□□□ -0.99
SSBP2-201ENST00000320672 HTATIP2Q9BUP3 242 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 GMIPQ9P107 970 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 OR10H1Q9Y4A9 318 aa8.9□□□□□ -0.99
SSBP2-201ENST00000320672 MYO3AQ8NEV4 1616 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 FOSL2P15408 326 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 THOP1P52888 689 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 SPIBQ01892 262 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 BIKQ13323 160 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CDK20Q8IZL9 346 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MCOLN3Q8TDD5 553 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 SMPDL3BQ92485 455 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MTMR9Q96QG7 549 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 PORCNQ9H237 461 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 GDF3Q9NR23 364 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CHRAC1Q9NRG0 131 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 UXTQ9UBK9 157 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DRG1Q9Y295 367 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 USP31Q70CQ4 1352 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 OR51F1A6NGY5 319 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 RECQL5O94762 991 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DBIP07108 87 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 RPS12P25398 132 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DSC2Q02487 901 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 ATXN7L2Q5T6C5 722 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 ZNF605Q86T29 641 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 EXOC3L1Q86VI1 746 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 UNC5BQ8IZJ1 945 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.89□□□□□ -0.999e-7■■■■■ 60.5
SSBP2-201ENST00000320672 ASF1AQ9Y294 204 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 KLRC4O43908 158 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 OR10H2O60403 315 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 NDUFS2O75306 463 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 PSMG1O95456 288 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 ATP5C1P36542 298 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MPP1Q00013 466 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 ZNF268Q14587 947 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 FAAH2Q6GMR7 532 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 GPR142Q7Z601 462 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 HMGN2P46Q86SG4 172 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DNAJC1Q96KC8 554 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 TBX5Q99593 518 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 EMILIN2Q9BXX0 1053 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CFAP97Q9P2B7 532 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 SALL4Q9UJQ4 1053 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 AREL1O15033 823 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 TRIM24O15164 1050 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MTSS1O43312 755 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 PAICSP22234 425 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CES1P23141 567 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 RRP1BQ14684 758 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CATSPERGQ6ZRH7 1159 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 DHRSXQ8N5I4 330 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 CCDC185Q8N715 623 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 PRELID2Q8N945 189 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 NXNL1Q96CM4 212 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MYL12BO14950 172 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MT-CYBP00156 380 aaPredicted RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 RENBPP51606 427 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MRPS35P82673 323 aaKnown RBP8.89□□□□□ -0.99
SSBP2-201ENST00000320672 TAF2Q6P1X5 1199 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 TRIM40Q6P9F5 258 aa8.89□□□□□ -0.99
SSBP2-201ENST00000320672 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms