RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 POLR2LP62875 67 aaKnown RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ECT2LQ008S8 904 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DLX2Q07687 328 aaPredicted RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ELP6Q0PNE2 266 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SEMA5AQ13591 1074 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 TAF5Q15542 800 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 HEATR6Q6AI08 1181 aaKnown RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SCYL2Q6P3W7 929 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CYS1Q717R9 158 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 CCDC91Q7Z6B0 441 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 MIB1Q86YT6 1006 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SPEM1Q8N4L4 309 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SH2D3CQ8N5H7 860 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ALLCQ8N6M5 410 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 DDI1Q8WTU0 396 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 HEXDCQ8WVB3 486 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SPATA13Q96N96 652 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PSMG3-AS1Q96PY0 264 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PSMB7Q99436 277 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 GBA3Q9H227 469 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 TMEM245Q9H330 911 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 LRRC40Q9H9A6 602 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SP110Q9HB58 689 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 SGK2Q9HBY8 427 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 XAB2Q9HCS7 855 aaKnown RBP3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 PREBQ9HCU5 417 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 LTB4R2Q9NPC1 389 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 LZTFL1Q9NQ48 299 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 FAM114A2Q9NRY5 505 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 MMP17Q9ULZ9 603 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
SCAMP1-201ENST00000320280 ADARB2-AS1A8MUL3 147 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 GPR89AB7ZAQ6 455 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 KCNK3O14649 394 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 BUB1O43683 1085 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 MAFKO60675 156 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 DEAF1O75398 565 aaPredicted RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 POP4O95707 220 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 SPATA31D3P0C874 917 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 GPR89BP0CG08 455 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 PYGMP11217 842 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CYP2A6P11509 494 aaPredicted RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 TNNT1P13805 278 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 GOT1P17174 413 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CR2P20023 1033 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 NOS3P29474 1203 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 KCNQ1P51787 676 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 DCDC1P59894 354 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CREB5Q02930 508 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 LMAN2Q12907 356 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 ELAVL3Q14576 367 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 STARD3Q14849 445 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 MORF4L2Q15014 288 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 SIX1Q15475 284 aaPredicted RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 HNRNPA1L2Q32P51 320 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 SLC44A4Q53GD3 710 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 NKAPLQ5M9Q1 402 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 LY6G5CQ5SRR4 150 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 NAPEPLDQ6IQ20 393 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 PARM1Q6UWI2 310 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 MFSD7Q6UXD7 560 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 C20orf204Q6ZNR8 217 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 SPATA31D4Q6ZUB0 917 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 WDR5BQ86VZ2 330 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 DCP2Q8IU60 420 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CCDC50Q8IVM0 306 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 NRSN1Q8IZ57 195 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 HTR3CQ8WXA8 447 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 OR8D1Q8WZ84 308 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 HSPH1Q92598 858 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 NELL1Q92832 810 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 LOXL4Q96JB6 756 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 C1QTNF1Q9BXJ1 281 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 ELOVL2Q9NXB9 296 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 DTLQ9NZJ0 730 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CALCOCO1Q9P1Z2 691 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 FETUBQ9UGM5 382 aa3.34□□□□□ -1.88
SCAMP1-201ENST00000320280 CTAGE15A4D2H0 777 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 EFCAB8A8MWE9 144 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MSI1O43347 362 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 HTRA2O43464 458 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 LZTS3O60299 673 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CST8O60676 142 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 KCNJ13O60928 360 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TULP3O75386 442 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 KAT7O95251 611 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ECEL1O95672 775 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FGF1P05230 155 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CTAGE8P0CG41 777 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ITIH2P19823 946 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C5AR1P21730 350 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NTSR1P30989 418 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 COILP38432 576 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TNNT3P45378 269 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CCR5P51681 352 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 RNASE9P60153 205 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NTHL1P78549 312 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IFRD2Q12894 506 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PEX6Q13608 980 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 HIF1AQ16665 826 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms