RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 WHRNQ9P202 907 aa15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-202ENST00000318007 TARSL2A2RTX5 802 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 KPNA3O00505 521 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ADAM23O75077 832 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 PDGFBP01127 241 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 HOXB2P14652 356 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 CTPS1P17812 591 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ITIH2P19823 946 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 SLC8A1P32418 973 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TNFRSF4P43489 277 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 GEMP55040 296 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 CCDC38Q502W7 563 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 CFAP58Q5T655 872 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ART4Q93070 314 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 KLHL32Q96NJ5 620 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 SERPINB12Q96P63 405 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 UHRF1Q96T88 793 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TBL1YQ9BQ87 522 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 C2orf42Q9NWW7 574 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 IL36AQ9UHA7 158 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 STARD13Q9Y3M8 1113 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 GOLGA6CA6NDK9 693 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 GOLGA6BA6NDN3 693 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 FAM170BA6NMN3 283 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 CTIFO43310 598 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 SYNCRIPO60506 623 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 GOLGA6DP0CG33 693 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 HSPA9P38646 679 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TNNT3P45378 269 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 NSUN2Q08J23 767 aaKnown RBP eCLIP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 FASTKD3Q14CZ7 662 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 MORF4L2Q15014 288 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 MSS51Q4VC12 460 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 KCTD11Q693B1 232 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 KDELC1Q6UW63 502 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ZNF534Q76KX8 674 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 METTL3Q86U44 580 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ZSWIM9Q86XI8 627 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ANKMY2Q8IV38 441 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 MPP5Q8N3R9 675 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 SEC14L1Q92503 715 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 FMO2Q99518 471 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TDRD1Q9BXT4 1180 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ATP13A3Q9H7F0 1226 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 LRRC40Q9H9A6 602 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TBC1D17Q9HA65 648 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 LMAN1LQ9HAT1 526 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 PRSS16Q9NQE7 514 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 ZDHHC18Q9NUE0 388 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 GOLGA6AQ9NYA3 693 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 WNT16Q9UBV4 365 aa15.55■□□□□ 0.08
PDLIM5-202ENST00000318007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 EDDM13A0A1B0GTR0 161 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 MAN2B1O00754 1011 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 DCNP07585 359 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 ALPIP09923 528 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 GLULP15104 373 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 COL9A1P20849 921 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 NTSR1P30989 418 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 PSMD8P48556 350 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 EPHB1P54762 984 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 CDK18Q07002 472 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 MPP3Q13368 585 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 POU6F1Q14863 301 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 BBS9Q3SYG4 887 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 TJAP1Q5JTD0 557 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 CERCAMQ5T4B2 595 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 ALG1LQ6GMV1 187 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 SDE2Q6IQ49 451 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 CASC4Q6P4E1 433 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 PCGF5Q86SE9 256 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 VOPP1Q96AW1 172 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 ISG20Q96AZ6 181 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 HEPHQ9BQS7 1158 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 LTB4R2Q9NPC1 389 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 WASF2Q9Y6W5 498 aa15.54■□□□□ 0.08
PDLIM5-202ENST00000318007 KANSL1LA0AUZ9 987 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 BUD23O43709 281 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 ZNF189O75820 626 aaPredicted RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 GSRP00390 522 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 CHRNB1P11230 501 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 SERPINA4P29622 427 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 AP1S1P61966 158 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 CUL1Q13616 776 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 HIF1AQ16665 826 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 SIRPB2Q5JXA9 342 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 UBAP2Q5T6F2 1119 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 C4orf22Q6V702 233 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 TRIM67Q6ZTA4 783 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 MICALCLQ6ZW33 695 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 CAND1Q86VP6 1230 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 BLOC1S5Q8TDH9 187 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 MFSD1Q9H3U5 465 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 SHOC2Q9UQ13 582 aa15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 POP4O95707 220 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-202ENST00000318007 HNRNPLP14866 589 aaKnown RBP eCLIP15.53■□□□□ 0.085e-8■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms