RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 NLGN3Q9NZ94 848 aa15.76■□□□□ 0.11
FOXR1-201ENST00000317011 LHX3Q9UBR4 397 aa15.76■□□□□ 0.11
FOXR1-201ENST00000317011 TP53BP1Q12888 1972 aaPredicted RBP15.75■□□□□ 0.11
FOXR1-201ENST00000317011 TSPAN11A1L157 253 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 GOLGA6L3A6NEY3 463 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 NEMP2A6NFY4 417 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 DDX3XO00571 662 aaKnown RBP eCLIP15.75■□□□□ 0.11
FOXR1-201ENST00000317011 FPGTO14772 594 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 INSIG1O15503 277 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 HNF1BP35680 557 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 CSNK1DP48730 415 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 HCAR3P49019 387 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 SUOXP51687 545 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 RAD51Q06609 339 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 CA9Q16790 459 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 TMEM52BQ4KMG9 183 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 ERMARDQ5T6L9 678 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 CDCP2Q5VXM1 449 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
FOXR1-201ENST00000317011 RYBPQ8N488 228 aaPredicted RBP15.75■□□□□ 0.11
FOXR1-201ENST00000317011 USP29Q9HBJ7 922 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 ITM2BQ9Y287 266 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 ASXL3Q9C0F0 2248 aa15.75■□□□□ 0.11
FOXR1-201ENST00000317011 K7ESM1 405 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 TOR1BO14657 336 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 BUB1BO60566 1050 aaPredicted RBP15.74■□□□□ 0.11
FOXR1-201ENST00000317011 PRAMEF11O60813 436 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
FOXR1-201ENST00000317011 GP1BAP07359 652 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 ITIH2P19823 946 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 YPEL5P62699 121 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 EIF2B5Q13144 721 aaKnown RBP15.74■□□□□ 0.11
FOXR1-201ENST00000317011 AGERQ15109 404 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 ZNF542PQ5EBM4 170 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 FIGNQ5HY92 759 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 PARGQ86W56 976 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 PSTKQ8IV42 348 aaKnown RBP15.74■□□□□ 0.11
FOXR1-201ENST00000317011 NETO2Q8NC67 525 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 APOLD1Q96LR9 279 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 TBATAQ96M53 351 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 PEBP4Q96S96 227 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 DUSP23Q9BVJ7 150 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 SLC39A8Q9C0K1 460 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 ISCUQ9H1K1 167 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 IFNKQ9P0W0 207 aa15.74■□□□□ 0.11
FOXR1-201ENST00000317011 J3KR12 359 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 RIOK3O14730 519 aaKnown RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 TPP1O14773 563 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 LZTS3O60299 673 aaPredicted RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 MMP20O60882 483 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 IGSF6O95976 241 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 MT-CO3P00414 261 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 RHOAP61586 193 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 NSUN2Q08J23 767 aaKnown RBP eCLIP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 GRM3Q14832 879 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 FILIP1LQ4L180 1135 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 C19orf48Q6RUI8 117 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 PTAR1Q7Z6K3 402 aaPredicted RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 DNAAF5Q86Y56 855 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 ARHGAP12Q8IWW6 846 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 TP53I13Q8NBR0 393 aaPredicted RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 ZNF641Q96N77 438 aaPredicted RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 TRIM7Q9C029 511 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 SUV39H2Q9H5I1 410 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 MBNL1Q9NR56 388 aaKnown RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 GPATCH2LQ9NWQ4 482 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 DNAJC28Q9NX36 388 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 SALL4Q9UJQ4 1053 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 PNMA8BQ9ULN7 279 aaPredicted RBP15.73■□□□□ 0.11
FOXR1-201ENST00000317011 AP4E1Q9UPM8 1137 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 CLCA2Q9UQC9 943 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 ITPR1Q14643 2758 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 NBEAQ8NFP9 2946 aa15.73■□□□□ 0.11
FOXR1-201ENST00000317011 ADAMTS20P59510 1910 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 TMCO5BA8MYB1 307 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 NEMP1O14524 444 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 TM7SF2O76062 418 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 ALPPL2P10696 532 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 PSMA2P25787 234 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 MIPP30301 263 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 IGFALSP35858 605 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 PAPOLAP51003 745 aaKnown RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 ZNF135P52742 658 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 UBASH3AP57075 661 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 TPI1P60174 286 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 PDE1CQ14123 709 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 GSE1Q14687 1217 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 UGP2Q16851 508 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 COL28A1Q2UY09 1125 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 KDM7AQ6ZMT4 941 aa15.72■□□□□ 0.11
FOXR1-201ENST00000317011 ZNF548Q8NEK5 533 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 HNRNPLLQ8WVV9 542 aaKnown RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 KCTD15Q96SI1 283 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 SNRNP25Q9BV90 132 aaKnown RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 UBA2Q9UBT2 640 aaPredicted RBP15.72■□□□□ 0.11
FOXR1-201ENST00000317011 CFAP69A5D8W1 941 aa15.71■□□□□ 0.11
FOXR1-201ENST00000317011 EEF2KO00418 725 aaKnown RBP15.71■□□□□ 0.11
FOXR1-201ENST00000317011 FFAR2O15552 330 aa15.71■□□□□ 0.11
FOXR1-201ENST00000317011 TLX3O43711 291 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms