RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CCDC126Q96EE4 140 aa14.06□□□□□ -0.16
VAMP2-201ENST00000316509 FBXO6Q9NRD1 293 aaPredicted RBP14.06□□□□□ -0.16
VAMP2-201ENST00000316509 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.06□□□□□ -0.16
VAMP2-201ENST00000316509 TAGLN3Q9UI15 199 aa14.06□□□□□ -0.16
VAMP2-201ENST00000316509 STOML2Q9UJZ1 356 aa14.06□□□□□ -0.16
VAMP2-201ENST00000316509 DOCK4Q8N1I0 1966 aa14.06□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ATXN1LP0C7T5 689 aaKnown RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 LAG3P18627 525 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CREMQ03060 361 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CTBP1Q13363 440 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 DEFB128Q7Z7B8 93 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 TMPRSS6Q8IU80 811 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 DENND6AQ8IWF6 608 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 BRSK1Q8TDC3 778 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 UTP4Q969X6 686 aaKnown RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 PSKH2Q96QS6 385 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 SEMA3CQ99985 751 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 MRPL57Q9BQC6 102 aaKnown RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 MGME1Q9BQP7 344 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 NMUR2Q9GZQ4 415 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 DRC3Q9H069 523 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ILKAPQ9H0C8 392 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 C1orf21Q9H246 121 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF395Q9H8N7 513 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF358Q9NW07 568 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 SLC2A6Q9UGQ3 507 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 TBX21Q9UL17 535 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ZFP37Q9Y6Q3 630 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 GOLGA8TH3BQL2 631 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 GYG2O15488 501 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 COCHO43405 550 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 HSPA4LO95757 839 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 LMNAP02545 664 aaKnown RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 KITP10721 976 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 AOC1P19801 751 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ACVRL1P37023 503 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CHRNA4P43681 627 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 OXCT1P55809 520 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 DNAJB13P59910 316 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 MAXP61244 160 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 IRF9Q00978 393 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 DLG2Q15700 870 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ADGRF1Q5T601 910 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 SLC41A1Q8IVJ1 513 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CMTR2Q8IYT2 770 aaKnown RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 KIRREL3Q8IZU9 778 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 TMEM151AQ8N4L1 468 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 VN1R3Q9BXE9 311 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 KLF16Q9BXK1 252 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 CDH19Q9H159 772 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 ATXN3LQ9H3M9 355 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
VAMP2-201ENST00000316509 VTI1BQ9UEU0 232 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 TBC1D30Q9Y2I9 924 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 RAP2CQ9Y3L5 183 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 NUMBLQ9Y6R0 609 aa14.05□□□□□ -0.16
VAMP2-201ENST00000316509 A0A1B0GVM2 712 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 TCAF2A6NFQ2 919 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 H3BNC9 293 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 GSC2O15499 205 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 UPP2O95045 317 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SEC24AO95486 1093 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 NDST3O95803 873 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SLC6A4P31645 630 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 MPP1Q00013 466 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 PLD1Q13393 1074 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 FAM83EQ2M2I3 478 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
VAMP2-201ENST00000316509 DDX53Q86TM3 631 aaKnown RBP14.04□□□□□ -0.16
VAMP2-201ENST00000316509 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
VAMP2-201ENST00000316509 TTC8Q8TAM2 541 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SCYL1Q96KG9 808 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 MRPL46Q9H2W6 279 aaKnown RBP14.04□□□□□ -0.16
VAMP2-201ENST00000316509 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SPG21Q9NZD8 308 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
VAMP2-201ENST00000316509 SPECC1L-ADORA2AF8WAN1 911 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 ZNF195O14628 629 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 NPHS1O60500 1241 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 LYPLA1O75608 230 aaPredicted RBP14.03□□□□□ -0.16
VAMP2-201ENST00000316509 STC2O76061 302 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 RBP1P09455 135 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 PSMA3P25788 255 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 HOXD9P28356 352 aaPredicted RBP14.03□□□□□ -0.16
VAMP2-201ENST00000316509 ELF1P32519 619 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 IDH3AP50213 366 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
VAMP2-201ENST00000316509 PRAMEP78395 509 aa14.03□□□□□ -0.16
VAMP2-201ENST00000316509 PRKAA1Q13131 559 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms