RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 POP4O95707 220 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 APOC2P02655 101 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 ATP1A1P05023 1023 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 CCNB1P14635 433 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 MAOBP27338 520 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PTPN7P35236 360 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PTGER3P43115 390 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 DSC2Q02487 901 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 ZBTB16Q05516 673 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 RAD51Q06609 339 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PPIDQ08752 370 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 NIPAL4Q0D2K0 466 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 BYSLQ13895 437 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 RFTN1Q14699 578 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 PRKD1Q15139 912 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 NOMO1Q15155 1222 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 KCTD19Q17RG1 926 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 AGBL4Q5VU57 503 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 FAM46CQ5VWP2 391 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 TIGD7Q6NT04 549 aaPredicted RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 GDPD4Q6W3E5 623 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 METTL3Q86U44 580 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 SLC41A1Q8IVJ1 513 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PAF1Q8N7H5 531 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SUMF1Q8NBK3 374 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 TFB1MQ8WVM0 346 aaKnown RBP7.95□□□□□ -1.14
CDC42-201ENST00000315554 ATG4AQ8WYN0 398 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SNX19Q92543 992 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 MAML1Q92585 1016 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 HSPA12BQ96MM6 686 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 TSGA13Q96PP4 275 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PSKH2Q96QS6 385 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SEMA3CQ99985 751 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 BTBD1Q9H0C5 482 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 EPC1Q9H2F5 836 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SMOC1Q9H4F8 434 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 NOD2Q9HC29 1040 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 DYRK4Q9NR20 520 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SMARCAL1Q9NZC9 954 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 GGT7Q9UJ14 662 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 ITM2BQ9Y287 266 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 PCDHGC4Q9Y5F7 938 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 SHROOM3Q8TF72 1996 aa7.95□□□□□ -1.14
CDC42-201ENST00000315554 GPR179Q6PRD1 2367 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CXorf51AA0A1B0GTR3 108 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 C16orf96A6NNT2 1141 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 GPR37O15354 613 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 KIF5CO60282 957 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TJP3O95049 919 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SEMA4FO95754 770 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PTPN3P26045 913 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RBL1P28749 1068 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 OXTRP30559 389 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 MAT2AP31153 395 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 CNR2P34972 360 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ABL2P42684 1182 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RENBPP51606 427 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ADPRHP54922 357 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TAS2R38P59533 333 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 EIF3EP60228 445 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 GNG11P61952 73 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PPP2CBP62714 309 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PPP2CAP67775 309 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CREB5Q02930 508 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TRAF2Q12933 501 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SNX1Q13596 522 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 HNRNPDQ14103 355 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 IHHQ14623 411 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ELF2Q15723 593 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PIP5KL1Q5T9C9 394 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PMS2CLQ68D20 193 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 DARS2Q6PI48 645 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 NCEH1Q6PIU2 408 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 USP30Q70CQ3 517 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ERN2Q76MJ5 926 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 LPCAT2Q7L5N7 544 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ASCL5Q7RTU5 278 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SLC13A5Q86YT5 568 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 LRRC49Q8IUZ0 686 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 BBS5Q8N3I7 341 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 DCLK2Q8N568 766 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 TEX26Q8N6G2 289 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 CNTD1Q8N815 330 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 PDCD6IPQ8WUM4 868 aaKnown RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 C1orf54Q8WWF1 131 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 KLK6Q92876 244 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NKD2Q969F2 451 aaPredicted RBP7.94□□□□□ -1.14
CDC42-201ENST00000315554 AGAP3Q96P47 875 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 QKIQ96PU8 341 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■■□□ 17.4
CDC42-201ENST00000315554 SMIM14Q96QK8 99 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 WDR24Q96S15 920 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 MGME1Q9BQP7 344 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 RAB23Q9ULC3 237 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 SLCO1B1Q9Y6L6 691 aa7.94□□□□□ -1.14
CDC42-201ENST00000315554 NUMA1Q14980 2115 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms