RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 PPP1R16AQ96I34 528 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 EDEM2Q9BV94 578 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 CPEB1Q9BZB8 566 aaKnown RBP17.32■□□□□ 0.36
PUF60-201ENST00000313352 SUV39H2Q9H5I1 410 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 NOD2Q9HC29 1040 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 PCDHGC4Q9Y5F7 938 aa17.32■□□□□ 0.36
PUF60-201ENST00000313352 KCNK3O14649 394 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 SLC31A1O15431 190 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 LATO43561 262 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 SERPINF2P08697 491 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 CD27P26842 260 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 MMP13P45452 471 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 SFSWAPQ12872 951 aaKnown RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 ZBTB17Q13105 803 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 ZNF211Q13398 564 aaPredicted RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 ZNF235Q14590 738 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 IFI16Q16666 785 aaKnown RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 TEX26Q8N6G2 289 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 MAML1Q92585 1016 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 OLFM3Q96PB7 478 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 MGME1Q9BQP7 344 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 PCED1AQ9H1Q7 454 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 C10orf88Q9H8K7 445 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 SLC6A14Q9UN76 642 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 A0A1B0GVT2 93 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 MATN3O15232 486 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 PYGMP11217 842 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 RAD51Q06609 339 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 NSUN2Q08J23 767 aaKnown RBP eCLIP17.31■□□□□ 0.36
PUF60-201ENST00000313352 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 ZNF284Q2VY69 593 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 TFDP3Q5H9I0 405 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 RCOR2Q8IZ40 523 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 EXD1Q8NHP7 514 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 FAM118BQ9BPY3 351 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 GTPBP2Q9BX10 602 aaKnown RBP17.31■□□□□ 0.36
PUF60-201ENST00000313352 OSBPL1AQ9BXW6 950 aa17.31■□□□□ 0.36
PUF60-201ENST00000313352 A0A1B0GTW7 788 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 H0Y8X5 98 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 DDX3YO15523 660 aaKnown RBP17.3■□□□□ 0.36
PUF60-201ENST00000313352 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 CCNB1P14635 433 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 CCNCP24863 283 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 CTNNA2P26232 953 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 CSNK1DP48730 415 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 CCR5P51681 352 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 DSC2Q02487 901 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 PPIDQ08752 370 aaKnown RBP17.3■□□□□ 0.36
PUF60-201ENST00000313352 GRIK2Q13002 908 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 HNRNPDQ14103 355 aaKnown RBP17.3■□□□□ 0.36
PUF60-201ENST00000313352 PRAMEF14Q5SWL7 426 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 PEX26Q7Z412 305 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 GPR161Q8N6U8 529 aaKnown RBP17.3■□□□□ 0.36
PUF60-201ENST00000313352 CNTD1Q8N815 330 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 SMIM14Q96QK8 99 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 NUSAP1Q9BXS6 441 aaKnown RBP17.3■□□□□ 0.36
PUF60-201ENST00000313352 KDM4CQ9H3R0 1056 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 IL21RQ9HBE5 538 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 RBM22Q9NW64 420 aaKnown RBP eCLIP17.3■□□□□ 0.36
PUF60-201ENST00000313352 TTLL3Q9Y4R7 772 aa17.3■□□□□ 0.36
PUF60-201ENST00000313352 A0A0U1RQS6 177 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 C4orf47A7E2U8 309 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 AREL1O15033 823 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 JCHAINP01591 159 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 GNSP15586 552 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 HOXD12P35452 270 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 ITKQ08881 620 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 NIPAL4Q0D2K0 466 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 AP1B1Q10567 949 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 TRAF2Q12933 501 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 TRIM69Q86WT6 500 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 HORMAD1Q86X24 394 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 NUDCD1Q96RS6 583 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 PREBQ9HCU5 417 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 AMFRQ9UKV5 643 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 CEP250Q9BV73 2442 aa17.29■□□□□ 0.36
PUF60-201ENST00000313352 IGLON5A6NGN9 336 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 A8MX80 341 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 ARHGAP33O14559 1287 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 RAD51BO15315 384 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 PAK4O96013 591 aaPredicted RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 LMNB2Q03252 620 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 UGP2Q16851 508 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 TMEM259Q4ZIN3 620 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 STPG1Q5TH74 334 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 ZC3H18Q86VM9 953 aaKnown RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 CEP76Q8TAP6 659 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 ECHDC3Q96DC8 303 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms