RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 JAM2P57087 298 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 POLR2LP62875 67 aaKnown RBP13.27□□□□□ -0.28
SNED1-201ENST00000310397 USP4Q13107 963 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 GNA13Q14344 377 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.28
SNED1-201ENST00000310397 NID2Q14112 1375 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 AIF1P55008 147 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 SMIM11AP58511 58 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 ATP13A4Q4VNC1 1196 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 KLHL23Q8NBE8 558 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 CCL15-CCL14A0A0B4J2E2 113 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 TISP43B9A030 160 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 AVILO75366 819 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 SLC26A3P40879 764 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.29
SNED1-201ENST00000310397 GRIK4Q16099 956 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 CCL15Q16663 113 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 AKAP14Q86UN6 197 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 SLITRK2Q9H156 845 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 SGTAO43765 313 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 RAB25P57735 213 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 TGFB2P61812 414 aa13.27□□□□□ -0.29
SNED1-201ENST00000310397 IFRD1O00458 451 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 CKMP06732 381 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 SLC7A2P52569 658 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ACSM2AQ08AH3 577 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ACSM2BQ68CK6 577 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 PMF1Q6P1K2 205 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ADAMTSL2Q86TH1 951 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ELMO3Q96BJ8 720 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 FMO4P31512 558 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ARMC6Q6NXE6 501 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 RNF180Q86T96 592 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 NFASCO94856 1347 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 MTA2O94776 668 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 RPN2P04844 631 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 SPESP1Q6UW49 350 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 GPRIN3Q6ZVF9 776 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 CHMP1BQ7LBR1 199 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 SELENOMQ8WWX9 145 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 GNEQ9Y223 722 aaKnown RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 UMPSP11172 480 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 DARSP14868 501 aaKnown RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 GSTM5P46439 218 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 SLC1A5Q15758 541 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 GCNT7Q6ZNI0 430 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ANKRD52Q8NB46 1076 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 OR2T34Q8NGX1 318 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 OR2T3Q8NH03 318 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNED1-201ENST00000310397 RPS6KB2Q9UBS0 482 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ATP6V0D1P61421 351 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 PSMD5Q16401 504 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 PAGE2BQ5JRK9 111 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 GALNT15Q8N3T1 639 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 LPCAT1Q8NF37 534 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 PNPT1Q8TCS8 783 aaKnown RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 ATXN3LQ9H3M9 355 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ATP6V1HQ9UI12 483 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 GNPTGQ9UJJ9 305 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 WBP11Q9Y2W2 641 aaKnown RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 TRAF6Q9Y4K3 522 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 FADS3Q9Y5Q0 445 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 CAPN8A6NHC0 703 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ULK1O75385 1050 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 TNFRSF21O75509 655 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 BANF1O75531 89 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 ZNF286BP0CG31 522 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 MBL2P11226 248 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 KLF10Q13118 480 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 OFCC1Q8IZS5 231 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 PTGR2Q8N8N7 351 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 C18orf25Q96B23 403 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 NOL11Q9H8H0 719 aaKnown RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
SNED1-201ENST00000310397 TNFSF13BQ9Y275 285 aa13.26□□□□□ -0.29
SNED1-201ENST00000310397 DYRK3O43781 588 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ZNF12P17014 697 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 MATKP42679 507 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ALDH9A1P49189 494 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 UCMAQ8WVF2 138 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PRDM12Q9H4Q4 367 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 HAT1O14929 419 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 TCEA3O75764 348 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 OTCP00480 354 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 HIRAP54198 1017 aaPredicted RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 STARD3Q14849 445 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms